Panicum hallii (Hall's panicgrass): 112876554
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Entry
112876554 CDS
T07366
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03440
Homologous recombination
phai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112876554
03460 Fanconi anemia pathway
112876554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phai03032
]
112876554
03400 DNA repair and recombination proteins [BR:
phai03400
]
112876554
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112876554
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Topoisomerases
112876554
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
112876554
FA (Fanconi anemia) pathway
112876554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
112876554
NCBI-ProteinID:
XP_025796470
LinkDB
All DBs
Position
9:70567476..70575890
Genome browser
AA seq
920 aa
AA seq
DB search
MQPGGGGAAIRVLNVAEKPSVAKAVAQILSRGSMQSRAGRSQYNRVFEFNYAINGQACRM
LVTSVTGHLMELEFEERFRRWHSCDPADLFHAPVRKSVPQDKQAIKQTLEEEARRCQWLV
LWLDCDREGENIAYEVIEVCTGANSHLNIWRAHFSALIDREIHESVQHLGRPNKLFADAV
DARQEIDLRIGASFTRFQTMLLKDAFVIDVTGDGRNLVLSYGPCQFPTLGFIVERFWEIQ
AHEPEEFWTINCTYTSDEGTASFGWIRGHLFDYPSAVILYEMCVEEPMATVQNVRNQEKL
KYPPYPLSTLELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIV
REQVEHPVWGAYAHRLLTPEERLWRNPSNGGHDDKAHPPIHPTKFSRGENNWSPDHNKLY
ELVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRFDSWGGTLLPTY
NIGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKD
ENTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKSEVLESCLQQMK
ACFLDARVNKAKLLDAMGTFFARSSRPINETQNPVEAVRPCPACHESEMVLKQRQTGEFM
VGCRSYPQCRNVVWLPGSISEASVTNQVCPICTPGPVYKIQFKFRRRDIPPNFDVDHLGC
VGGCDDILQELMEISRFGSRSQAATPARGQTPNGVRQGPPRQDLHTNFRPAGQLNNENPS
VMHSQGFRSTHTQNPSNASDAGQVLCTSCGEPCILRIANTDANRGRKFYKCQDPGCGFFK
WEDELETATTRGRRGRGSSRQAPASASAGRRGGAQTRGRRGRGRNADGGMFVSATGDTVS
GCCFTCGDPSHFANACPNRR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccggcggcggcggcgccgcgatccgcgtgctgaacgtggcggagaagccgtcg
gtggcgaaggccgtggcacagatcctgtcgcgcggctcgatgcagtcgcgggcggggcgg
tcccagtacaatcgcgtcttcgagttcaactacgccatcaacggtcaagcctgccgcatg
ctcgtcacctccgtcacgggccacctcatggagctcgaattcgaagaacggttccgccgc
tggcactcctgcgaccccgccgacctcttccacgcccccgtccgcaagtccgtgccccag
gacaagcaggctataaaacaaactttggaagaagaagctaggaggtgccagtggctggtg
ctatggcttgattgtgatagagagggtgagaacatagcatatgaagtgatcgaggtttgt
acaggtgctaacagtcatcttaacatttggagggctcatttctcagctttgattgacagg
gaaatacatgaatctgtgcaacatcttggcagacccaacaaactctttgcagatgctgtg
gatgcaagacaggagattgatctacgcattggtgcctccttcacaaggtttcaaacaatg
ctgttaaaagatgcatttgtaattgatgtcactggggatggcaggaatttagttctgagc
tatggtccttgtcagtttccaaccctaggtttcattgttgagcgtttctgggagattcaa
gctcatgaacctgaggagttctggacaataaattgtacttatacttcagatgaaggcact
gcatcttttggttggatacgtggtcatttgtttgattacccatctgctgttatactctat
gaaatgtgtgtggaagaaccaatggcaacagttcaaaatgttaggaaccaagaaaagtta
aaataccccccatatccactaagtaccctggagcttcaaaaacgtgcttctaggtacttc
agaatgagttcagagcacacaatgaaggtggctgaagaactttaccaagcaggattcatt
agttatccaaggacagaaactgataacttctctccaaacactgatcttcatgcaattgta
cgtgaacaagtggagcatccagtatggggagcatatgctcaccgacttctaactcctgaa
gaaagactttggagaaatcccagcaatggtggtcatgatgacaaggcacatcctcctatt
catccaaccaaattttcaagaggtgaaaataactggagcccagaccacaataaattatat
gagctcgttgttcgccatttccttgcatgttgctctcaaccagctgttggagctgaaaca
actgttgaaattgacatagctggtgaacagttcaatgcatcagggcgtgttgtacttgct
aaaaattatttggatgtttatcgctttgactcatggggtggcacattacttccaacgtac
aacattggacagcagtttgttccgacaactttaacacttgattctggagtgactcggcca
ccccctcttcttgctgaagctgaccttcttagctgcatggataaagcaggaattggcact
gatgcaaccatgcatgatcacataaagaagttgcttgaccgttgttatgcaaccaaagat
gaaaacacacgtttctccccgacaaatcttggtgaggcactggtgatgggttatgatgaa
atggggtatgagctttggaagccttatttaagatcaatgatggaagctgatatgaaatca
gtaagcataggtacaaagagtaaatcagaagtactcgagagttgtttgcagcagatgaag
gcttgctttcttgatgcaagggtgaacaaagcgaagctccttgatgcaatggggacattc
tttgcgagatctagtaggcctataaatgagacacaaaatccagtagaggctgtgaggcca
tgtcctgcgtgccacgaatctgaaatggtgctgaagcaaaggcagactggtgaatttatg
gttgggtgccgaagttatccacaatgtagaaacgtggtatggctcccaggatctatttca
gaagcatctgtcactaatcaagtttgtcctatctgcacaccaggccctgtttacaagatc
caatttaagttccgtcggagggatattccaccgaatttcgatgttgatcacctaggttgt
gtgggcggatgtgatgatatactccaagagcttatggagataagtaggttcggaagtcgt
agccaggctgcaactccagcaagaggacagactccgaatggtgtaaggcaggggcctcca
aggcaggatttacatactaattttcgtccagcaggccaacttaataatgagaacccatcg
gttatgcattctcaaggtttccgttcaacccatacccaaaacccaagtaacgcatcagat
gcaggtcaagtgctgtgcacttcatgtggagaaccttgcatattgcggattgctaataca
gatgctaacagggggaggaaattctataaatgtcaagatcctggctgtggcttctttaaa
tgggaagacgaactggagaccgctacgacgagaggccggcgcgggcgtggtagcagcagg
caggcgcctgcgtctgcatctgcaggacgcagaggcggcgcccaaacccgaggccggagg
ggcagaggccgtaacgctgacggtgggatgttcgtttcggcgacgggcgacaccgtgtcc
ggctgctgctttacctgcggcgatccttcccacttcgccaacgcctgcccgaaccggaga
tag
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