Panicum hallii (Hall's panicgrass): 112876677
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Entry
112876677 CDS
T07366
Name
(RefSeq) probable methionine--tRNA ligase isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00450
Selenocompound metabolism
phai00970
Aminoacyl-tRNA biosynthesis
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
112876677
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112876677
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phai01007
]
112876677
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112876677
Enzymes [BR:
phai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
112876677
Amino acid related enzymes [BR:
phai01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112876677
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112876677
Prokaryotic type
Other AARSs
112876677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
112876677
NCBI-ProteinID:
XP_025796619
LinkDB
All DBs
Position
9:68157596..68163676
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AA seq
801 aa
AA seq
DB search
MASSPPPPPKLPIPGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIY
ICGTDEYGTATETKAMEEKCSPKEICDKYHAIHSEVYKWFNIKFDKFGRTSSPEQTEVCH
AIFHKLMENNWLTENTMQQLYCDTCQRFLADRLVEGTCPNKVCNAAARGDQCETCSTLLN
PTELIDPKCKVCKNTPRVRDTDHLFLELPLLKDKLVNYINETSVAGMWSQNAIQATNAWL
KEGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDPDNV
ELFQFMGKDNVPFHTIMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSKGIGVFGND
AKDTNIPPEVWRYYLLMNRPEASDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAG
AGYDSIVPDVPNAESHPLTKAYAEKTSKWVEQYLDAMEKVKLKQGLKCAMAISSDGNAYL
QESQFWKLYKEDSAACAIVMKTSLGLVYLLACLLEPFMPSFSEEVLRQLNLSPEENLSFS
EEKGEIAKAKSPWDFVPAGHKIGKPAPLFKELKDEGVALHREKYAGSQAERSSKAAADAE
ASKVANQLKGTKLSDGGPKKEQKKQSGGSKSKTAEADITVAKLDIRVGLIRKAEKHPDAD
SLYVEEIDVGEDTPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASN
EDHTKVELVEPPESAAVGERVTFAGYSGEPEASLSGKSKTWEKLAAELHSNGELVACYKD
VPFTTSAGVCKVKTIANGEIR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccccgccgccgccgccgaagctgccgatccccggccgccgcaacatactc
atcaccagcgcgcttccgtatgtcaataatgtcccccacctcgggaacatcatcggctgt
gtgctcagcgccgatgtgttcgcgcggtactgccggctccggggttacaacgccatctac
atatgcggtactgatgagtacggcacggccaccgagacgaaggccatggaggagaagtgc
tcgcccaaggagatctgcgacaagtaccatgctattcatagtgaagtttacaagtggttt
aacataaaatttgacaagtttggacgcacgtcctctcctgagcaaacagaagtctgccat
gcaattttccataaattaatggaaaacaattggctcacagaaaatactatgcagcagctt
tactgtgatacatgtcaaagatttttggctgatcggcttgttgaaggaacatgcccaaac
aaagtctgtaatgcagcagcacgtggagatcagtgtgaaacatgcagcaccttgttgaat
ccaaccgaactgattgacccgaagtgtaaggtttgtaagaatactccacgtgttcgtgac
acagatcacttattcttggagcttcctctgttaaaagacaagttggtaaactacatcaat
gaaacttcagtagctggtatgtggagtcaaaatgctattcaagcaacaaacgcatggctg
aaggaagggctaaagccgcgctgcatcaccagagatcttaaatggggtgtccctgtacct
cacgagaagtataaagacaaggtgttctatgtttggtttgatgcacctattggttatgtg
tctattacggcgtcatatacacctgactgggagaagtggtggaaggatcctgataatgta
gaattgttccagtttatgggcaaagataatgtgccatttcacacgatcatgttcccttca
acactacttggaactggggaaaagtggacaatgatgaagacaataagtgttactgaatat
ctaaattatgaagcaggtaaattctccaagagtaaaggtataggagtctttggtaatgat
gcaaaagatacaaatattcctcctgaagtatggcgatactacctgcttatgaatcgccct
gaggcatcagatacactctttacttgggctgatttgcaagccaaattgaacagcgagttg
ctgaacaacttggggaacttcatcaatcgcgtgctaagttttgttgcaaaaccagctgga
gcaggatatgattctattgtacctgatgttcctaatgcggaatcacatccattgacaaag
gcatatgcagaaaaaacaagtaaatgggttgagcaatatctcgatgcaatggaaaaggtt
aaactgaaacaaggactgaagtgtgcaatggccatttctagtgatggaaatgcgtatctg
caagagagccagttttggaaactttacaaggaagattcagcagcatgtgcgattgtgatg
aaaacttcacttggtcttgtgtacctccttgcctgtctgctggagcctttcatgccctcc
ttctctgaggaagtgttacgtcaattaaacttgtcccctgaagaaaacctgtctttcagt
gaagaaaaaggagaaattgcaaaggcaaaatctccttgggattttgtaccagcagggcac
aaaattggaaagcctgctcctctattcaaggaattgaaagatgaaggcgtagctctccat
agagaaaaatatgcaggtagccaagctgagagaagctcgaaagcagcagctgatgctgaa
gccagcaaagttgctaaccagctcaagggcacgaaattatctgatggaggtccaaagaag
gaacaaaagaaacaatctggtggttcaaaatcaaagacagcagaggcagatattaccgtt
gcaaaattggatattcgagtagggcttatcagaaaagcagagaagcatccagatgccgat
tccctttatgtagaggagatcgatgttggggaggacacaccaagaacagtggtcagtggt
ctcgtgaaattcatacctcttgaagaaatgcagaatcggaaagtctgtgttctttgcaac
ctgaaaccggtggcaatgcgcggtataaaatcacacgccatggttttggctgcatcaaat
gaggaccacacgaaggttgagttggtggagccaccagaatctgccgccgtgggggagcgc
gtcaccttcgctgggtactcgggggagcccgaggcttccctcagcggcaagagcaagacg
tgggagaagctggccgccgagctgcacagcaacggcgagctcgtggcgtgctacaaagac
gtgcccttcacaacctcggccggagtctgcaaggtgaagacaatagcgaacggggagatt
cgctag
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