Panicum hallii (Hall's panicgrass): 112876734
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Entry
112876734 CDS
T07366
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112876734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phai04040
]
112876734
Ion channels [BR:
phai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112876734
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GFIT
Motif
Pfam:
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
112876734
NCBI-ProteinID:
XP_025796688
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Position
9:complement(4686999..4691957)
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AA seq
725 aa
AA seq
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MPPLAFLRSLPARLLERVCDGVRGSPGAVRDEESGGSGRSSVSAGHPAGECYACTQPGVP
AFHSTTCDQVHEPGWDADAGSSLVPVQAQQATPAAPVSAAQHAGAAARWLFGPVLDPRSK
RVRRWNRWILLGRAAALAVDPLFFYALSIGRAGQPCLYMDAGLAAAVTALRTCADAAHLA
HVLLQFRLAYVSRESLVVGCGKLVWDARAIAAHYARSAKGLWFDLFVILPIPQVIFWLVI
PKLIREEQVKLIMTILLLMFIFQFLPKVYHSIHIMRKMQKVTGYIFGTIWWGFGLNLFAY
FIASHIAGGCWYVLAIQRIASCLQEECKKKNSCDLISLACSKEICFRSSWSSNINGFACD
TNVTSSGQQNLSTCLSGNGSFAYGIYLGALPVISSNSLAVKILYPIFWGLMTLSTFGNDL
APTSNGLEVIFSIINVLSGLMLFTLLIGNIQVFLHAVLARKRKMQLRFRDMEWWMRRRQL
PSRLRQRVRKYERERWAAVTGDEEMEMIKDLPEGLRRDIKRYLCLELVKQVPLFHGMDDL
ILDNICDRLRPLVFSSGEKVIREGDPVQRMVFILQGKLRSTQPLTKGVVATCILGAGNFL
GDELLSWCLRRPFVDRLPASSATFECVEAAQAFCLDAPDLRFITEHFRYKFANEKLKHTA
RYYSSNWRTWAAVNIQLAWRRYRARKVDATAVVAPPPAAGPDDGDRRLRHYAAMFMSLRP
HDHLE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcgcgttcctccgctccctccccgcgaggctgctcgagcgggtgtgcgac
ggggtcagggggagcccgggcgcggtgcgggacgaggagtccgggggcagcggccggtcg
tcggtgtcggcgggccacccggcgggggagtgctacgcgtgcacgcagcccggggtgccg
gcgttccactccacgacctgcgaccaggtgcacgagccgggctgggacgccgacgcgggg
tcctcgctagtgccggtccaggcgcagcaggccacgccagcggcgccggtgtcggcggcg
cagcacgcgggcgccgcggcgcggtggctgttcgggcccgtgctggacccgcggagcaag
cgcgtgcggcgctggaaccggtggatcctgctgggccgggccgccgcgctggcggtggac
ccgctcttcttctacgcgctctccatcggccgcgccggccagccctgcctctacatggac
gccggcctcgccgccgcggtcaccgcgctccggacctgcgccgacgccgcgcacctcgcg
cacgtcctgctccagttccgcctcgcctacgtctcccgcgagtccctcgtcgtcggctgc
ggcaagctcgtctgggacgcccgcgccatcgccgcgcactacgcccgctccgccaagggc
ctctggttcgacctcttcgtcatcctccccatcccgcaggtcattttctggctggttata
ccaaagttaataagggaagagcaagttaaacttatcatgacaatattgctgctcatgttc
atatttcaattcctccccaaggtgtaccacagtattcatatcatgaggaaaatgcagaag
gtgactggttacatctttggaacaatatggtggggatttggtctaaatctatttgcctat
ttcattgcgtctcatatcgcaggtggttgttggtacgttcttgcaattcagcgtattgct
tcctgccttcaggaggaatgcaagaaaaaaaacagttgcgatctaatatcgctcgcttgt
tcaaaggagatatgttttcgttcttcttggtcatcaaatattaatggattcgcatgtgac
acaaacgtgacctcctctggtcaacaaaacttgtctacctgtctaagtggaaatgggtcc
tttgcttatggaatctatttgggggctcttcctgttatatcaagcaattcgcttgctgtc
aaaatactctaccctatattttgggggctcatgactctcagtacttttggtaacgatctg
gcccctacgagcaatggtctcgaggtgatattcagcataattaatgtcctcagtggcttg
atgctcttcacactgctgattggaaacatacaggtatttctacatgccgtcctggcaagg
aagcggaagatgcagctgcgtttccgggacatggaatggtggatgagacggaggcagctg
ccgtcccgcctgaggcagagggtccgcaagtacgagcgcgagcgctgggcggccgtcacg
ggagacgaggagatggagatgatcaaggacctgcctgaaggactcaggcgagacatcaag
cgctacctctgcctggagctggttaagcaggttccgctgttccatggcatggacgacctg
atcctggacaacatctgcgaccggctgcggccgctggtgttctccagcggcgagaaggtg
atccgcgagggcgacccggtgcagcgcatggtgttcatcctgcaaggcaagctccggagc
acgcagccgctgaccaagggcgtggtggcgacgtgcatcctgggcgcgggcaacttcctg
ggcgacgagctgctgtcgtggtgcctgcgccgccccttcgtggaccggctcccggcctcg
tcggcgacgttcgagtgcgtcgaggccgcgcaggcgttctgcctcgacgcgccggacctg
cgcttcatcaccgagcacttccggtacaagttcgccaacgagaagctcaagcacacggcg
cggtactactcgtccaactggcggacgtgggccgccgtcaacatccagctcgcgtggcgc
cggtacagggccaggaaggtggacgcgaccgcggtggtggcgccgccgccggccgccggt
cccgacgacggggaccggcggctcaggcactacgcggccatgttcatgtcgctccggccg
cacgatcacctcgagtaa
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