Panicum hallii (Hall's panicgrass): 112876816
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Entry
112876816 CDS
T07366
Name
(RefSeq) transcription initiation factor IIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112876816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112876816
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
112876816
Prokaryotic type
Archaeal type
TFE
112876816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Dimerisation
A24_N_bact
zf-C2H2_6
wHTH-PRTase_assc
Motif
Other DBs
NCBI-GeneID:
112876816
NCBI-ProteinID:
XP_025796780
LinkDB
All DBs
Position
9:complement(31020517..31025949)
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AA seq
455 aa
AA seq
DB search
MASIEPFNRLVRLAARAFYDDISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLA
KALKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKAHNVAAAAVASDGPPVTKEGEEKI
KMHTHSYCCLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPSCNKRYSAFDALQL
VSYTDEYFHCETCNGELVAESDKLASEEMGDGDDNVRKRRREKLKDMQQRIEEQLKPLVA
QLERVKNLPAPEFGSLQTWERANIGAFAHGDPSVADSSRNSQGQYGTPMPYMGETKVEVE
MLGDGVKEEGTESGKNGSELKVLPPWMIKDGMNLTKEQRGETSKASKLDEKSEAKDDKKQ
DSKDDQIIQEEYIKAYYEALRKKQEEEEAKRRMQQEGETIVSDSQSERQVGKKYKREDED
EGNATEQYKLADLNAEAQESGDDEDDYVWEEGSVE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcgagcccttcaaccggctggtgaggctggcggcgcgcgccttctacgac
gacatctccatgaagggcgacaaccagcccaagacctcccgcggggataaccgcggcatg
gccgtcgtcgtcctcgacgcgctcaccaggcggcagtgggtccgggaggaagatttggct
aaagcgttgaagctccactcgaaacagctgcggcgcattctccgcttctttgaagaggag
aagctagtcacaagggatcaccggaaggagtctgcaaaaggagcaaaagcacataatgtt
gcggctgctgcagttgccagtgatggtcctccagtcactaaggagggagaagagaaaata
aagatgcacacgcattcatactgttgcttggattatgctcagatttgtgatgttgtaagg
taccggattcaccgcatgaagaaaaaattgaaggatgaattggacagcagaaatacaatt
caacactacatatgtcctagctgtaataaaaggtattcagcctttgatgcactgcaactg
gtaagctacacagatgagtacttccattgtgaaacttgcaacggtgaactggttgcagag
agtgacaagctcgcttctgaggaaatgggagatggcgatgacaatgttagaaagcgtagg
cgtgagaaattgaaggacatgcaacaaagaattgaagagcaattgaagccattggttgca
caacttgaaagagtgaagaatctacctgcgcctgagtttgggagtctgcagacatgggaa
agagcaaatattggcgcttttgcacatggtgaccctagtgtagctgattcatctagaaac
tcacaagggcagtatggtacaccaatgccatacatgggtgagacaaaggttgaagttgaa
atgttaggtgatggtgtgaaagaagaaggtactgaatcaggtaaaaatggttcggaactg
aaagtcttacctccatggatgatcaaagatggcatgaatcttacaaaggaacaaagagga
gagaccagcaaggcatcaaaacttgatgaaaaatcagaagccaaggatgacaaaaaacag
gactcgaaagatgatcaaattatacaggaggaatacataaaggcttattatgaggccttg
aggaaaaagcaggaagaggaagaagcaaaaaggagaatgcagcaagaaggtgagactatt
gtctctgattctcaatctgaacgccaggtgggcaagaaatacaagcgggaggatgaagat
gaagggaatgcaaccgagcaatacaaattggcagatttaaatgcggaggcccaagaatct
ggtgatgacgaagatgattatgtgtgggaagagggttctgttgagtga
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