Panicum hallii (Hall's panicgrass): 112877201
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Entry
112877201 CDS
T07366
Name
(RefSeq) histone-binding protein MSI1 homolog
KO
K10752
histone-binding protein RBBP4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112877201
03083 Polycomb repressive complex
112877201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112877201
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112877201
Histone modification proteins
HAT complexes
HATB complex
112877201
HDAC complexes
Sin3A-HDAC complex
112877201
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112877201
PRC2.2
112877201
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112877201
Heterochromatin formation proteins
Other heterochromatin formation proteins
112877201
Chromatin remodeling factors
NuRD complex
112877201
NuRF complex
112877201
NuRF complex (fruit fly)
112877201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
eIF2A
WD_LRWD1
Beta-prop_HPS5
MIOS_WD40
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
112877201
NCBI-ProteinID:
XP_025797207
LinkDB
All DBs
Position
9:9648386..9654856
Genome browser
AA seq
430 aa
AA seq
DB search
MPKAGGGADEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRAE
PPGKDHSVQKMILGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGK
VQIVQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLK
GHNSEGYGLSWSIFKEGHLLSGSDDAQICLWDIKANSKNKSLDALQIFKHHDGVVEDVAW
HLRHEYLFGSVGDDHHLLIWDLRSPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTD
KTVKLFDLRKIDKSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQEQT
PEDAEDGPPELMFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDL
PISDEPPKTS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccggcggcggcgcggacgaggaggagttccgcgccgaggtggaggagcgc
ctcatcaacgaggagtacaagatctggaagaagaacacgccattcctctacgacctcgtc
atcacgcacgcgctcgaatggccctccctcaccgtgcagtggctccccgaccgcgccgag
ccgccggggaaggaccactccgtccagaagatgatcctggggacgcacacctccgacaac
gagcccaactacctcatgctcgcgcaggtccagctgcccctcgacgacgccgaggccgac
gcgcgccactacgacgacgaccacgccgacatcggagggttcggcgccgcatccggcaag
gtgcaaattgttcagcagataaatcatgatggagaggtcaatcgagctcggtatatgccc
caaaattcatttataattgctaccaagacagttagtgcagaagtatatgtcttcgattat
agcaagcacccatcaaagcctccactagatggtgcatgtaaccctgatttacggctgaag
ggacataactctgaaggatatggcttatcctggagtatttttaaagagggacatttgttg
agtgggtctgatgatgctcaaatttgcttatgggacattaaagcaaatagtaaaaacaaa
agtcttgacgccttgcagatttttaagcatcatgatggcgttgttgaagatgttgcttgg
catttgaggcatgaatacttatttgggtcagttggtgatgatcatcatcttctgatttgg
gacctgcggtctcccgcccctactaagcctgttcagtcagtggtggcacaccagggcgag
gtgaactgcctggctttcaacccgttcaatgaatgggttgttgcaactggttctactgac
aagactgtcaaattatttgatcttaggaagattgataagtctctgcacacctttgactgt
cacaaagaggaagtatttcaagttggatggagcccgaagaatgagactatacttgcatcc
tgttgcctgggcagaagactcatggtctgggacctaagcaggattgatcaagaacaaaca
ccagaggatgcagaagatggccctcctgagctcatgttcatccatggaggccataccagc
aagatctctgatttctcctggaacccctgtgaggactgggtgattgctagcgtcgctgaa
gacaacatcctccagatatggcagatggctgagaacatctaccatgatgaagatgatctg
ccgataagcgacgagccaccgaagacatcttga
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