KEGG   Panicum hallii (Hall's panicgrass): 112877553
Entry
112877553         CDS       T07366                                 
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease 1-B-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03030  DNA replication
phai03410  Base excision repair
phai03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112877553
   03410 Base excision repair
    112877553
   03450 Non-homologous end-joining
    112877553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phai03032]
    112877553
   03400 DNA repair and recombination proteins [BR:phai03400]
    112877553
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phai04147]
    112877553
DNA replication proteins [BR:phai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    112877553
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     112877553
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     112877553
Exosome [BR:phai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112877553
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc 5_3_exonuc_N RHS_N
Other DBs
NCBI-GeneID: 112877553
NCBI-ProteinID: XP_025797666
LinkDB
Position
9:1353640..1359549
AA seq 421 aa
MGIKGLTKLLAEHAPGAAVQRRVENYRGRVIAVDASLSIYQFLIVVGRKGSELLTNESGE
ITSHLQGMLNRTVRMLEAGIKPVFVFDGEPPEMKKKELAKRSLKRDDATKDLNRAIEIGD
EDSVEKFSKRTVKVTKKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYQLXMPG
LAVASEDMDSLTFGARRFLRHLTDLGYKKSLVTEFEVSKVLEELGLTMDQFIDLCILSGC
DYCENIKGIGGQRALKLIRQHGCIEEVVQNLKQTRFSVPEDWPYQEVRTLFKQPNVCTGI
PDFMWTSPDSQGLMDFLSTENSFSPDRVAKAVEKITVARDKYSPERLKLLTPVASLPGSH
TEKEPTCILGSPGQGLKIRSAPQVCKSSSSGFRYASSKPFMLDMQSGFHGRPYAFSSFSS
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgggaatcaagggcttgacgaagctgctggcggagcacgcgccgggggccgcggtgcag
cggcgggtggagaactaccgcggccgcgtcatcgccgtcgacgccagcctcagcatctac
cagttcctcattgtggttggaaggaaagggtcagagcttctgaccaatgagtctggtgaa
atcacgagtcatctgcagggtatgttgaaccggacagtaagaatgctagaagcagggata
aagcctgtttttgtttttgatggcgagccacctgaaatgaagaaaaaggagcttgcaaaa
aggtccttaaagagggatgatgctacaaaagatcttaatagagctattgagattggggat
gaggactcagttgaaaaatttagcaaaagaactgtcaaggtcacaaaaaagcacaatgat
gattgtaagagactgttaagattgatgggtgtccctgttgttgaggcaccaggtgaggct
gaagcacagtgtgcagctctttgtgaaaatcaccaggtataccaactgtgaatgccaggt
ctagctgtagcttcagaagacatggactctctgacttttggtgctcgaaggtttcttcgt
cacttaactgatcttggttataagaaatctcttgtgacagaatttgaagtgtcaaaggtt
ttggaagaacttggactcacaatggatcagttcattgacttgtgtatccttagtggatgt
gattactgtgagaatattaaaggtattggggggcaaagagccctgaaactcattcgacag
catggttgcatagaagaagttgtgcaaaatcttaaacagacgagattcagtgttccagaa
gactggccttaccaggaagttcggacattgtttaaacaacctaatgtttgtacaggaatt
ccagatttcatgtggacctcacctgactcacagggccttatggatttcttgtcaaccgaa
aacagtttcagtcctgatagggtagcaaaggcggtagaaaagattactgttgcaagggac
aaatattccccagaaagattgaagcttttgacaccagttgctagcttaccgggatctcat
actgagaaggaacccacatgcatactaggctctccaggacaaggtctgaagatcaggtct
gctccacaagtgtgcaagagttcaagctctggcttcagatatgctagctcaaaaccattt
atgctggacatgcaatcaggattccatggaagaccttatgctttctcttctttctcttcc
ctctaa

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