Panicum hallii (Hall's panicgrass): 112877616
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Entry
112877616 CDS
T07366
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112877616
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112877616
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
112877616
NCBI-ProteinID:
XP_025797746
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All DBs
Position
9:complement(61057265..61063080)
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AA seq
484 aa
AA seq
DB search
MSSSGGGGGQQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTKSGVGANRNQA
FVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVTIE
GVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPS
YLLPQHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRK
VEAQGNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAV
AKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTMPPGVIQGVPQPPGAAATS
TGWQGNIQGAGAYAPPGVPAQSHNANGQVPSWNSGNSGYPPAPGAYPGQMYPSPAPYAAS
GGFPNTPPAAPPHYAASGGFPTHPAAPPHELHTSQQMPPQHGNQSGPSGAPATSQPPPPP
SYYH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgggcggcggcggggggcagcagttccgctatacgcagacgccgtctaag
gtgctccacctgcggaacctgccgtgggagtgcgcagaggaggagctcgtcgagctctgc
aagcccttcggccgcatcgtcaacaccaaaagcggcgtcggcgccaaccgcaaccaggcc
ttcgtcgagttcactgatgttaatcaagcaatctcgatggtttcttactttgcatcatct
tcggaaccagcacaaattcgaggcaaaactgtttacattcagtattcaaataggcaagaa
ataattaacaacaagagccctggagagactgctggaaatgtgttgcttgttacgatagag
ggtgttcaagctagtgatgtcaccattgatgtaatccatatggttttctcagcatttgga
tatgttcacaaaatagccacctttgaaaaggctgcaggttttcaggcattgatccagtat
actgatgcagccactgcttcagcggctagagaagccttagacggaaggagcatcccaagt
tacttgcttccacagcatgtaacatcctgctgcctgcgaatttctttctctgcacataag
gatttgaatatcaagtttcagtcaaaccgcagcagggattataacaatccatatcttcca
attaactattctgccatggatggtacattacagcctgctgttggtgctgatggaaggaaa
gtggaggctcaaggcaatgttcttcttgcatcaattgagaatatgcaatatgccgttaca
gtagatgttcttcatactgtgttctcagcatttggtacagtccaaaaaattgctattttt
gagaagaatggtggcacacaagctttgattcagtatcctgatgtaactacagctgcagtt
gcgaaggaagcattggaaggtcattgcatctacgatggtggctactgtaagcttcacctg
tcatactctcgtcatactgatctgaatgtaaaggcacatggtgacaagagcagggattac
acaatgccgcctggtgtaatccaaggggtgccacaaccacctggtgcagcagctacatcc
accgggtggcaaggtaatattcaaggagccggggcatatgccccacctggtgtccctgcc
caaagccacaacgccaacggacaagtgccaagttggaattccggcaactcagggtatccc
ccagccccaggagcatatccaggtcagatgtacccatctccagcaccgtacgcagcatca
gggggcttccctaataccccacccgctgctccaccgcattacgcagcatcagggggcttc
cctacccatcctgctgctccgccgcacgagttgcacacttcacagcagatgccacctcag
catggaaatcagtctggaccgtcaggcgcacctgcaaccagtcaaccaccaccaccacca
tcgtactaccattaa
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