KEGG   Panicum hallii (Hall's panicgrass): 112877788
Entry
112877788         CDS       T07366                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112877788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112877788
Spliceosome [BR:phai03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112877788
 Complex B
    112877788
 Complex C
   U2 SnRNP specific factors
    112877788
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_PARP14_3 xRRM DUF4523 RRM_YTH1 E1_4HB
Other DBs
NCBI-GeneID: 112877788
NCBI-ProteinID: XP_025797938
LinkDB
Position
9:64450986..64456054
AA seq 231 aa
MLSGDIPPNQTIYVNNLNEKVKKEELKRSLYALCSQYGRILDVVALKTQKLRGQAWVVFS
EITAATNAFRGLQDFDFYGKKMRVQYAKTKSDCIAKEDGTYAPKEKRKKQEEKAAEKKRR
AEEAQQSGPNASSQNNGTGYQASRLGKVSQEHLPPNNILFIQNLPDQTTSMMLQILFQQY
PGFREVRMIEAKPGIAFVEFEDDSQSHIAMQALQGFKITPENPMAISYAKK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgctgtccggcgacatccccccgaaccagaccatctacgtcaacaacctcaacgagaag
gtcaagaaagaagagttgaagaggtcgctttatgccctgtgctcacagtatggaaggata
ctggatgtggtggccttgaaaactcaaaaactgagggggcaagcatgggtggtgtttagc
gaaattacagctgctaccaatgctttccgaggattgcaggacttcgatttctacggcaaa
aaaatgcgagtccaatatgcaaaaacaaaatccgactgtattgcaaaagaagatggtact
tatgctcctaaggagaaaagaaagaagcaggaggagaaagctgctgagaaaaaacgacga
gcagaagaggcacaacaatctggtcccaatgcttctagtcagaacaatggaactggatac
caagcctctcgcctgggcaaggtctctcaagagcatctccctcccaacaacatcctcttc
atccagaacttgccggaccagaccacgagcatgatgctccagatcctgttccagcagtac
cctggcttccgggaagtccggatgatcgaagccaagccaggcatcgctttcgtggagttt
gaggacgacagccagtcccatatcgcgatgcaggccctccagggcttcaagatcacccca
gagaaccccatggctatatcctacgccaaaaaatga

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