Panicum hallii (Hall's panicgrass): 112877822
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Entry
112877822 CDS
T07366
Name
(RefSeq) protein argonaute MEL1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112877822
03036 Chromosome and associated proteins [BR:
phai03036
]
112877822
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112877822
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112877822
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112877822
microRNA pathway
RISC loading complex
112877822
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoL1
ArgoN
PAZ
ArgoMid
ArgoL2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112877822
NCBI-ProteinID:
XP_025797977
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All DBs
Position
9:3084991..3096568
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AA seq
1223 aa
AA seq
DB search
MVTLVDPEKKEKERVEREYKITIRIAERTDMYHLHQFLRGRQRDMPQETIQVLDVVLRES
PSWNYVTVSRSFFSTTFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVT
VIKFVEEFLSIRDTSRPLSDRDRVKIKKALRGVRIETNHQQDQIRRYKITVVTSMPMSQL
IFPVDEKGTRQTVVQYFWEKYNYRLKYGSWPCLQAGSDMRPVYLPMEVCKIVEGQRYSKK
MVLHNNYVEDKFAQEFGIKVCNDLVSVEARVLPPPLLKYHDSGREKTCVPSVGQWNMINK
KMINGGTIDNWTCLNFSRMPPEEVQRFCMDLTHMCNATGMNVIPRPFVEVKSAGPNHIEN
ALRDVHRRATQMVAQQGMGNQLQLLIVILPQVSGSYGKIKRVCETEIGIVSQCCLPKYLE
NVALKINVKIGGRNTVLERAFVHNGIPFEVPTIIFGADFTHAPPGENSASSIAAVVASMD
WLEITKYRGLVSAQPHRQEIIEDLFAVSKDPQKGHNVNGGMIRELLIAFRRKTNRRPERI
IFYRDGVSEGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRD
MTDKSGNILPGTVVDQRICHPTEFDFYMCSHPGIQVAINPEPKSRATNREVLNELVKLHR
KSTLGGKLPAYDGRKSLYTAGSLPFDSEEFMVTLVDPEKEEKERVEREYKITIRIAERTD
MYHLHQFLRGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTTFGHRGDIGEGLECW
RGYYQSLRPTQMGLSLNIDISATSVFKPVTVIKFVEEFLSIRDTSRPLSDRDRVKIKKAL
RRVCIETNHQQDQIRRCKITGVTPMPMSQLMFGVSTKVEEHIHRNIATFLVKVEGTSISV
RQNLSTTTIKMLVEHACDKRGIRNYDGYPVFLGKVLDDTKLLSDCKVCNNCIVEVRGRGR
AGRERRIKCTTFDDEMKDIDLFSVVSPLSKTLTNTKTQEKSATFLSGQAKWYGRQVFISL
CRMHFRKRSLDGKFNASHILFHDGRVVFDESCMEVDFTGHSCKNDYGVIAEIFKKWFRIP
DKAEKEVGSYYGWSERVEDVPAMYDTLVYDPFRRVDAPEETLYTENLRSCLKFARNHFRH
ARPDLSLERVEASFSLNLVDFLPMILQAIVKSFEGPPAFDMVTLLGDHVADIKCKRDVDA
ENPAKVIASPAKKPKISFSLQKK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggttaccctggttgatccggaaaagaaggagaaagaaagggtggagagagaatacaag
atcacaattcgaattgctgaaagaacagacatgtaccaccttcaccagtttctgcgtgga
agacagagggacatgcctcaggagaccatacaagtacttgatgttgtcctcagggagtct
ccgtcttggaattatgttacagtatccagatcctttttctctactacttttggtcacaga
ggagacatcggcgaggggcttgagtgttggagaggttactaccagagcctacgcccaaca
caaatggggctttcactgaatatagatatatccgcaacatcattttttaagcctgtgaca
gtgatcaaatttgtggaggagttcctcagcatacgtgatacctctcggcctttgtcagac
agagatcgtgtgaagataaagaaagcactacgtggagttcgtattgaaacaaatcatcaa
caggaccagattagaagatacaagataactgtggttacttccatgcctatgagccagctg
atatttcctgttgatgagaaaggaactagacagacagttgtgcagtacttttgggaaaaa
tataactacagattgaagtatggttcttggccctgtcttcaggctggcagtgatatgcgg
cccgtatatttgcctatggaggtttgcaagattgttgaggggcagagatactctaagaag
atggttctgcataacaattacgtggaggataagtttgctcaggaatttggcatcaaagtc
tgcaatgaccttgtttctgttgaagcccgcgtgctgcctccacccttgttgaaatatcat
gactctggtagggagaaaacttgtgtgccaagtgttggacaatggaacatgatcaataag
aaaatgatcaatggaggaactattgataactggacttgtttgaacttttcacgcatgcct
cctgaggaggtacagaggttctgtatggatctgactcatatgtgcaatgccactggaatg
aatgtcattccacgtccatttgttgaagtcaagtcagctggtcctaaccatatagagaat
gctttgagagatgtacacaggagggccacacaaatggttgcccaacagggaatgggaaat
cagctacagcttctaattgtaattctgcctcaagttagtggttcttatggaaaaatcaaa
agagtctgtgagactgaaatcggaattgtatctcaatgttgcttgccaaaatatctggaa
aatgttgcactcaaaatcaatgtcaagattggagggcgcaacacagttcttgagcgagcc
tttgtacacaatggcataccctttgaagtcccaactatcatctttggcgctgatttcaca
cacgcaccaccaggagagaactctgcatcatccattgctgctgtggtggcatcaatggac
tggctagaaatcaccaagtacagaggtctggtatctgctcaaccacaccgacaagagata
atagaagatctatttgctgtcagtaaagatccacagaaggggcacaatgttaatggtggc
atgatcagggagctactgattgctttccgcaggaaaacaaaccgcaggcctgagaggata
atattctatagggatggtgtaagtgaaggtcagttcagccatgtgctgcttcatgaaatg
gatgctatcagaaaggcttgtgcttctttggaggaaggatatctacctccagtcacgttt
gtggttgtccagaaaaggcatcacacgaggcttttccctgaggttcatggaaggcgtgat
atgactgacaaaagtggaaacattcttccaggaactgtggttgaccaaaggatttgtcat
cctactgagtttgatttctacatgtgtagtcatccaggtattcaggttgccattaatccc
gagccaaagtcaagagcaacgaacagggaagttcttaatgaactcgtcaagttgcatagg
aagtcaactctgggtggcaaattgcctgcctatgatggacggaagagtctgtatactgct
ggttcgcttccttttgattcagaggagtttatggttaccctggttgatccggaaaaggag
gagaaagaaagggtggagagagaatacaagatcacaattcgaattgctgaaagaacagac
atgtaccaccttcaccagtttctgcgtggaagacagagggacatgcctcaggagaccata
caagtacttgatgttgtcctcagggagtctccgtcttggaattatgttacagtatccaga
tcctttttctctactacttttggtcacagaggagacatcggcgaggggcttgagtgttgg
agaggttactaccagagcctacgcccaacacaaatggggctttcactgaatatagatata
tctgcaacatcagtttttaagcctgtgacagtgatcaaatttgtggaggagttcctcagc
atacgtgatacctctcggcctttgtcagacagagatcgtgtgaagataaagaaagcacta
cgcagagtttgcattgaaacaaatcatcaacaggaccagatcagaagatgcaaaataact
ggggttactcccatgcctatgagccagctgatgtttggcgtgtcaactaaagtagaagaa
catattcacaggaacattgccacttttttggttaaagttgagggtacatccatctctgtc
cgacaaaacttgagcaccacaacaatcaaaatgttggtagaacatgcatgtgacaagaga
ggcatcaggaattacgacggttaccctgtttttcttggaaaggtcttagatgatactaag
cttctctctgactgcaaagtctgcaacaattgcatagtcgaagtcaggggcaggggcagg
gctggccgggaaagacggatcaagtgcacaacttttgatgatgaaatgaaagatattgat
ctgttcagtgtggtttcccctctttctaagactttaacaaacactaaaacccaagaaaag
agtgcaacattcttatctgggcaagctaaatggtatggtcgccaagtgtttatctccttg
tgcaggatgcacttcagaaaaaggagcttggatggaaaatttaatgcaagtcacatcctc
tttcatgatggacgggttgtgtttgatgagagttgcatggaggtggattttactggacat
tcctgcaaaaatgactacggtgtgatcgcagaaatctttaagaaatggtttcgtatccct
gataaagcagagaaagaagttggaagctattatggttggagtgaaagagttgaagatgtt
cctgcaatgtatgatactctagtgtatgatccttttaggagggttgatgcaccagaagag
actctttatactgagaacctaaggagttgcttgaaatttgctagaaaccacttcaggcat
gcaagacctgatctttcgttggagagagttgaagcctcattttctttgaatttggtggac
tttctacccatgatactacaagcaattgtcaagagttttgaaggaccccctgcatttgac
atggtgacattgcttggcgaccatgttgcagacataaagtgcaagagagatgtagacgcg
gagaatcctgcaaaagtgattgcgtctcctgctaagaagccgaaaataagcttttcgtta
cagaaaaaatga
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