Panicum hallii (Hall's panicgrass): 112878214
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Entry
112878214 CDS
T07366
Name
(RefSeq) U3 snoRNP-associated protein-like YAOH
KO
K14793
ribosomal RNA-processing protein 9
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112878214
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
90S particles
Other 90S particles
112878214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_BBS7
Nop14
Motif
Other DBs
NCBI-GeneID:
112878214
NCBI-ProteinID:
XP_025798431
LinkDB
All DBs
Position
9:9585675..9592663
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AA seq
507 aa
AA seq
DB search
MAPRPRKRASHPTKPRAGSRRGGGGGDDDPFFESEPKRRRGGRDEDIESEDSDDDAVGFG
GAVDEDGDEGVKEEEEEETAGEKKVRMAKELLKKLSDAAKRKEEDEDEDEDEDEAGGRRV
AEILQRRQLEESGRKRRELASRVLPPEPKDGFKFIVKHRQPVTAVALSNDGDRGFSASKD
GVIAHWDVETGKSEKYLWPSENVLISHHAKPPLSAKRSKHILALAVSSDGRYLASGGMDR
HIHLWDVRSREHIQAFSGHRGPISCLAFGPDSSELFSGSFDRSIMQWNAEDRTYMNCLYG
HQNEILTMDALNKDRLLTVARDRTMHLWKIPEESQLVFRAPAAASLECCSFIDDKEFLSG
SDDGSIELWSIMRKKPTFIVRNAHPSLDSDDQELPKENGIHKPENVSMAQSWVSAVAARK
GSDLAASGAGNGLVRLWAIEPDSKGIRPLFKFKLDGFVNSLDIAKSGRFIVAGVGQEPRL
GRWGRVRSAQNGVAIHPIRLEGEKDEL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgcccccgcaagcgggcctcgcaccccaccaagccccgcgcgggctcccgc
cgtggcggcggcggcggtgacgacgaccccttcttcgagtccgagcccaagcgccgccgc
gggggccgcgacgaggacatcgagagcgaggacagcgacgacgatgcggtgggtttcggc
ggcgccgttgatgaggatggggacgagggggttaaggaggaggaggaggaggagactgcg
ggggagaaaaaggtgcggatggcgaaggagttgctgaagaagctgtcggacgccgctaag
aggaaggaggaggacgaggacgaggatgaggacgaggacgaagccgggggcaggcgggtg
gcggagatccttcagaggaggcagctcgaggagagcgggaggaagcggagggagctcgcc
tcaagggttttaccaccagaacccaaggatggctttaagtttattgtgaagcatcgacaa
cctgtaactgctgtggctttatccaacgatggtgatcgggggttttcagcatcaaaagat
ggagtcattgcgcattgggatgttgaaactggcaaaagtgagaagtatttatggccaagt
gaaaatgtattgatttctcatcatgctaaaccacctctatcagctaaaagaagtaagcat
atactagctttagctgtcagttcagatggtcgctacttggcgagtggtggtatggaccgt
catatccatttatgggatgttcgttcgcgggagcacatacaggcttttagcggtcatcgt
gggccaatatcatgccttgcctttgggccggattcatcagagttattctctggttctttt
gaccgttcaataatgcagtggaatgctgaagacagaacatatatgaactgtctatacggc
catcagaatgaaatcttgaccatggatgcgcttaataaagataggcttctgaccgtagca
cgggaccggacaatgcatctttggaagattccggaagaatcgcagttagtgttccgtgct
cctgctgctgcgtctttagagtgctgcagctttattgatgacaaggaatttttatctgga
tctgatgatggaagcatcgagctttggagcataatgaggaaaaaacctactttcatagtt
agaaatgctcatccttccctcgacagtgatgatcaagagttacctaaagaaaatggaatt
cataaacctgaaaatgtctcaatggcccagtcatgggttagtgctgttgccgcaagaaaa
ggttccgatcttgccgcatcaggagcaggaaatggtttagttcgtctctgggctattgaa
cctgattctaagggaattcgacctttgttcaaatttaaattggatggatttgtcaattct
ctggacattgccaaatctggacgctttattgttgctggtgttggccaggagcctcgcctt
ggaagatggggccgtgttcggtcggcgcaaaatggggttgccatccatccaatccgacta
gagggggagaaagacgagttgtag
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