Panicum hallii (Hall's panicgrass): 112878562
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Entry
112878562 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112878562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112878562
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112878562
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112878562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_6
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
112878562
NCBI-ProteinID:
XP_025798619
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All DBs
Position
1:complement(1646681..1650469)
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AA seq
316 aa
AA seq
DB search
MKGAFTMAPGSSIVTVVPESDCGDDGLSEALGGIRLDVDSTSKPWSTSLASVALSSLAGL
NDLLECPVCTNSMRPPILQCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAEQL
QLPCKYQSMGCTEIHPYKNKLKHEELCRFRPYNCPYAGSECLITGDVPFLVSHLINDHKV
DLHEGCTFNHRYVKPNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLRFMG
EESEAQGFGYSLEVGGGGRKLTWQGTPRSIRDSHRKVRDSFDGLIIHRNMALFFSGGSMQ
ELKLRVTGRIWREQVQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagcctttacaatggcaccgggaagcagcattgtgactgtagttcccgagtca
gactgtggagatgatggcctttctgaggcacttgggggtattaggcttgatgtagactct
acaagtaaaccatggtctacgtcactagccagtgttgcattatcatcattggctggcttg
aatgatttgctcgaatgcccagtgtgtacaaactcaatgcgtccacctatacttcagtgc
ccaaatggccacacaatttgctccagctgcaagcatagggtagacaaccattgcccaact
tgccgccaagaactgggaaacatcagatgtttggctcttgagaaagtggcagaacaactt
cagcttccatgcaaataccaaagcatgggatgcaccgagattcacccgtacaagaacaaa
ctcaagcatgaggagctctgcaggttcaggccatacaactgtccatacgcaggttcagag
tgtctgatcacaggtgatgttccgtttctggtgtctcatctcatcaatgaccataaggtg
gacctgcacgagggatgcacgttcaaccaccggtatgtgaagcccaacccttacgaagtg
gaaaatgctacatggatgctcacagtcttcaagtgtttcgggcagcacttctgcctgcac
tttgaggcattcctgcttgggatggcgccggtttacatggcgttcctgcggttcatgggc
gaggagagcgaggcacagggctttgggtacagcctggaggtgggtggtggtgggcggaag
ctgacatggcagggcactccgaggagcatcagggacagccaccggaaggtgcgggacagc
ttcgacgggctgatcatccaccggaacatggcgctcttcttctctggcggcagcatgcag
gagctcaagctgcgggtcactggacgcatctggagggagcaagtgcaatga
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