KEGG   Panicum hallii (Hall's panicgrass): 112878634
Entry
112878634         CDS       T07366                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04142  Lysosome
phai04144  Endocytosis
phai05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:phai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112878634
   04142 Lysosome
    112878634
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    112878634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112878634
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phai04147]
    112878634
Membrane trafficking [BR:phai04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    112878634
Exosome [BR:phai04147]
 Exosomal proteins
  Proteins found in most exosomes
   112878634
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B IcmW
Other DBs
NCBI-GeneID: 112878634
NCBI-ProteinID: XP_025798658
LinkDB
Position
Unknown
AA seq 1709 aa
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVIRAAEEANVYNDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG
LGLERAHMGIFTELGVLYARYRSEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFPYLLQFIREY
TSKVDDLVKDKIESQNEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPMGGM
GMPPMGGMGMPAMGPGPMPAFGMPPMGSY
NT seq 5130 nt   +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggc
atcgccccgcagttcgtcaccttcacccatgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgacggcctatcaccgccgactctgcgctcatgaaccccaacaccagaatcctc
gcgctcaaagcccaaatacctgggacaacacaggatcaccttcaaatattcaatattgag
gctaagactaagataaagtctcatcagatgccggagcaggttgtgttttggaaatggatc
actcccaagttgttgggtttagtaacacaaacatcagtttatcactggtcaattgaaggt
gattctgagcccaccaagatgtttgataggacagctaatctggcaaacaaccagatcatc
aactaccgatgcgacccagctgagaagtggcttgtgcttattgggattgcacctggtgcc
ccggagaggccacagctggtgaagggaaatatgcaacttttttctgttgatcagcagcgt
agccaggcacttgaagcccatgcagcatcttttgcatcatttaaggttgttggtaatgag
aacccatcaacccttatttgtttcgcctcgaagacaactaatgctggacaaatcacttca
aagttgcatgttattgaattgggcgcccagccagggaaacctggcttttctaagaaacaa
gccgacctcttcttcccaccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattacgaagcttggccttttgtttgtatatgatttg
gaaactgctgcagcagtttacagaaatagaattagtccagaccctatattcttgacagca
gaatcttcctcgactggtggattttatgccatcaacagaagagggcaggttttacatgcc
acagttaatgatgcaaccgttgtgccttttgtcagtggtcagttaaacaaccttgagcta
gctgtgaatcttgccaagagagccaatcttcctggtgcagagaacttggttgtgcaaaga
ttccaggaactgtttgcacagacgaaatacaaggaagcagctgagctggctgcagaatct
cctcaaggcctcctgagaacacctgagactgttgcaaagtttcagagtgttcctgtgcaa
gctgggcaaacacccccactgttacagtactttggtacattgctaactcgagggaagctc
aacgccttcgagtctcttgagctatctcgacttgttgtcaatcagaacaaaaagaacctt
ctggaaaattggttggcggaagacaagctagagtgcagtgaagaacttggagatcttgtc
aagactgtggacaatgatcttgccctaaaaatatacataaaggctagggcaacccctaaa
gttgttgcagcttttgctgaaaggagggagtttgacaagattcttatatactcaaagcag
gttgggtacactccagattatctcttccttctccagaccattttgcgtacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggaaggtggttgtccagtagattat
aatactattactgatcttttccttcagaggaatatgatacgggaggcaacagcttttttg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttggtgacatacccaaatgttgctgatgccattcttgctaatggtatgttcagt
cattacgaccgccctcgtattgctcagctgtgtgaaaaggcgggcttgtacttgcgtgct
ctccagcattactcagagttacctgatatcaagcgtgtcatcgtcaatacccatgccatt
gagccacaggcacttgttgagttctttggcaccctgtcaagagagtgggccttggagtgc
atgaaggaccttctactggtcaatctgagggggaatcttcaaatcgtcgtgcaggctgca
aaagaatactccgagcagctaggagttgatgcttgcataaaactatttgagcaattcaaa
tcttacgagggcctttactttttcttaggatcctatttgagctccagcgaggacccagaa
atccatttcaaatacattgaagcagctgccaggactggacagatcaaagaagtggaacgt
gtaaccagagagtctaacttctatgatgctgagaagacaaagaacttcttgatggaagca
aaactacctgatgcccgcccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtacacgaacaacatgcttcggtatattgaaggctatgtacagaaa
gtgaatcctgggaatgctcccttggtagtgggccaactactcgacgatgagtgccctgaa
gattttattaagggtttgattctctctgttcgttccctccttcctgttgagccactggtt
gatgaatgcgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg
agcgaaggtagccaagatgttcatgtccacaatgctcttgggaaaataatcattgacagc
aacaataatcctgagcatttccttactaccaacccgttttatgactcgcgcgttgtgggt
aaatactgtgaaaagcgggatcctacacttgctgttgttgcttacaggcgtgggcagtgt
gacgatgaacttattaacgtcactaacaaaaactcattgttcaagctgcaagccagatat
gtggttgaaagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcagctcattgaccaagtggtttcaaccgcattacctgagagcaagagcccggag
caagtgtctgctgctgttaaggctttcatgactgctgacctccctcatgaattgattgag
cttcttgaaaagattgttcttcagaattctgcgttcagtggaaatttcaatctgcagaac
ctgctcatcttgactgcgatcaaggcggacccatcgagagtcatggactatgtgaacaga
cttgacaactttgatgggcctgctgttggggaagttgctgttgaagcacaattgtatgaa
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcaatgttctcttg
gacaacatccgaagcatagaaagagctgaggagtttgctttccgtgttgaagaagatgct
gtttggagccaggttgccaaggcccagttacgtgaaggtttagtcagtgaagcaatcgag
tccttcatccgcgcagatgatgcggcacatttccttgatgtcatccgtgctgctgaggag
gccaatgtgtacaatgatttggttaagtatcttctgatggtaagacaaaaggcaagggag
cccaaagttgatggagaactcatctttgcatatgctaagattgatagactcagtgatatt
gaagagttcattcttatgccaaatgttgccaacctccaaaatgttggtgatcgtttgtat
gatgaagagctatatgaagctgcaaagatcatctatgccttcatctcaaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgtaag
gctaacagcgcgaaaacatggaaggaggtctgctttgcttgtgttgatgcagaggagttc
cgtcttgcacagatatgtggtctaaatattattgtccaggttgatgacttagaagaagtg
agtgaatactaccagaatagaggatgcttcaatgaacttattgctctcatggagagtggt
cttggtcttgaacgtgcacacatgggcatcttcacagaactgggagttctgtatgctaga
taccgttctgagaagcttatggagcacatcaaacttttctccacccgtcttaatattcct
aagcttatccgggcttgcgatgaacagcaacactggaaagaacttacctacctgtacata
cagtacgatgaatttgacaatgctgccaccactatcatgaaccattctccagatgcctgg
gatcatatgcagttcaaggatgtttgtgttaaagttgcaaacgttgaactatattacaag
gcagttcacttctatttgcaagagcaccctgatctcatcaacgatatgctaaatgtgctt
gcgctccgtttggatcataccagagttgtagacataatgcgcaaggctggtcagctgcat
cttgtgaagccttatatggttgcagttcagagcaacaatgtctctgctgtgaatgaagcg
ttgaatgagctttatgttgaagaggaagactacgagagactccgggaatcagttgacatg
cacgataactttgatcagataggtcttgctcagaagcttgagaagcatgaattgcttgag
atgaggaggattgctgcctacatctacaagaaggctggcagatggaagcaatccattgct
ttatcaaagaaagacaacatgtataaggattgcatggagacatgctcgcagtctggtgac
cgtgaactatcagaggacttgcttgtctatttcatcgagcagggaaagaaagaatgcttt
gcatcttgcctcttcatttgttacgacttgatccggcctgatgttgcccttgagcttgca
tggatgaacaacatggtggactttgccttcccatatctcctgcagttcattcgtgaatac
accagcaaggttgatgatttagtcaaggacaaaattgagtcacaaaatgaggaaagagcc
aaagagaaggaggagaaagatcttgttgctcagcagaacatgtatgcccagctgcttcct
cttgctttacccgctccgccgatgcctggcatgggtggtccgcctccgatgggtggaatg
ggcatgcctccgatgggtggaatgggtatgccggcaatgggtcctggtccgatgccagca
tttggaatgccaccaatgggaagctactag

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