Panicum hallii (Hall's panicgrass): 112878756
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Entry
112878756 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112878756
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112878756
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112878756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf-RING-like
zf-C3H2C3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
112878756
NCBI-ProteinID:
XP_025798755
LinkDB
All DBs
Position
1:52629733..52631269
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AA seq
384 aa
AA seq
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MDALPPPAAGDPFAATLPPSLPSPPPPSSSSSSLNLSPSLLIIAALLAFVFCASVSIHFL
LRCLARASSSSSSSHPSPSPFLARARGASGAEAEEVGAGSARRSAAAVGPEEAHSAEAVD
DEKERLIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAW
LRTTPSCPLCRAAVSLPHPPLPTAAPAAAGPGAQEPLDARVGSSNNNSRSFRVEIGSVSN
RRSSAAGDDRRTYSLGSFDYRVDEEVEAVVSRITRPAVSAAAKSATHQAAAATPGEALAE
AAGSRGWLREYVDRLASSASSLSGRWSARWSQGHGHHSRSQSQSHRPDDSWRWDPEAAAG
AAMHRAPDEEEPGFVALYRWIVGV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctcccgccgcccgccgccggcgacccgttcgcggccaccctcccgccgtca
ttgccgtccccgcccccgccgtcctcgtcgtcgtcgtcgctcaatctctccccctcgctg
ctcatcatcgccgcgctgctggcgttcgtcttctgcgcctccgtgtcgatccacttcctc
ctccgctgcctcgcccgcgcgtcgtcgtcgtcatcgtcgtcgcacccgtccccgagcccg
ttcctggccagggcgcgcggcgcgtccggggcggaggcggaggaggtgggggcggggtcc
gcgaggaggagcgccgcggcggtggggccggaggaggcgcattccgcggaggcggtggac
gacgagaaggagcggctgatcgcgtcgctgccgctgttcaccatggcgtcggcgctggcg
gcgctgcccaagagctccccggactgcgccgtctgcctctcgcccttctcccccgacgcc
gagctgcggctgctcccggcgtgccgccacgcgttccacgccgcctgcgtcgacgcctgg
ctccgcaccaccccgtcgtgcccgctctgccgcgccgccgtctcgctcccgcacccgccg
ctccccaccgccgcgcccgccgccgcggggccgggcgcgcaggagccgctcgacgcgcgg
gtcggcagcagcaacaacaactcgaggagcttccgcgtcgagatcggcagcgtgagcaac
cgccgctcctccgccgcgggcgacgaccgccgcacctactcgctcggctccttcgactac
cgcgtcgacgaggaggtggaggccgtggtgtcccgcatcacccgccccgcggtgtcggcg
gcggccaagtcggcgacccaccaggccgcggcggcgacccccggcgaggcgctggcggag
gcggccgggtcccgcgggtggctgcgcgagtacgtcgaccgcctcgcctcctcggcgtcg
tccctctccgggcggtggagcgcgcggtggagccaggggcacggccatcacagccgcagc
cagagccagagccaccggcccgacgactcgtggcggtgggaccccgaggcggcggcgggg
gcggcgatgcaccgcgcgccggacgaggaggagcccgggttcgtggccctgtaccgttgg
atcgtcggggtatag
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