Panicum hallii (Hall's panicgrass): 112878837
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Entry
112878837 CDS
T07366
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
phai03012
]
112878837
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112878837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
TPR_9
PAM2
TPR_MalT
TPR_8
CLU
TPR_16
DUF5969
TPR_1
Motif
Other DBs
NCBI-GeneID:
112878837
NCBI-ProteinID:
XP_025798854
LinkDB
All DBs
Position
1:complement(57893414..57903534)
Genome browser
AA seq
1765 aa
AA seq
DB search
MAPKAGKAKPKAKGDKKKKEEKVLPTVLDVTVETPDYTQLTLKGMSTDRILDIRKLLAVH
VDTCHLTSYSLSHEVRGAQLKDTVEVASLKPCHLSIVEEDYTEELAVAHVRRLLDIVACT
TAFGAKKPDQKPASPNAAAAAAEAAKPESPGKTAPGGGGGGEEPMYPPPKLGQFYDFFTF
SHLTPPLHYIRRSTRPFVHDKREDDFFQIDVRVCNGKPVTIVASQAGFYPAGKRALISRS
LVGLLQQTSRAFDGAYKALMKAFVEHNKFGNLPYGFRSNTWVVPPVVADSPSVFPPLPTE
DETWGGNGGGQGRDGKHDHRPWVKEFAILAAMPCKTAEERQVRDRKAFILHSLFVDVAVL
KAVASIQQLISNHTSSHEIANGTTGPVLHTEQVGDMKIAITKDKADASSKLDVKLDGSQA
PGMSSDELAQRNLLKGITADESATVHDTATLGVVIVKHCGYTAVVQVPVHTDLTTTSLAQ
QDIHIEDQPEGGSNALNVNSLRMLLHKSCAQSSGGVQRLQSCDPQDNETTQNFVRKILTD
SLQKLESEAPMVTRPIRWELGACWVQHLQSQASEKTETKKSDETKDVPTVKGLGKQFGQL
KEIKKKTDDKSGKGSYAKENSSPNTYNAHTDNTTSAKEDKEAVLQGLLPEAAFQRLKESE
TGLHAKSLDELIEMAHKYYDDTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGR
VVELSDKLPHIQSLCIHEMVVRAFKHILRAVIAAVDDVNDMADSIASCLNILLGPFPEEN
NGNCGEDHNLRKRWLEVFLIKRFEWKWKDEYSLDLRKYAILRGLCHKVGLELVTKDYDMD
MPHPFRKSDIIGVVPIYKHVACSSADGRTLLESSKTFLDKGKLEDAVNYGTKALAKLVAV
CGPYHRMTAGAYSLLAVVLYHTGDFNQAAIYQQKALDINERELGLDHPDTMKSYGDLAVF
YYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEAL
KCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEKTTLRILQAKLGSEDLRTQDAA
AWLEYFESKALEQQEAARNGTPKPDASIASRGHLSVSDLLDYINPDDELKAKEMQKKQAR
AKIKGRTGQNPSDLVDDEDQRSPLPNNDNLLTEKEDSGVKENGTFVEHVKVKDEIPSDTT
IHIPQDDFIEEYTSDEGWQAAVPKGRSTGSRKTGSGTRKPNLAKLNTNVFHSENGRYKGR
VPSNFSSPRVAPNETVAPVASSPLAKKLAKNSSFNSKAVSPAVSSSSGENSSNPNSKPAS
PAITAATAKVIQSTAPASQTVRKSLSYKEVAIAAPGTLVKALSEVHTEEKDTIDQGASVE
SAKPPKERNGHPSGEKDGATEVSQKGDTSQVSKSTDGGKSEQTDVFAGSQPEPEHKKTSD
ATEISVVKKTTDLAASVTSSATQTDPDAPNVEAQTVIEANDSSSNDDERDVGEDTPEQLS
SGGENEKSSPSESEKKETTSKLSAAAAPFNPSTVPAFGSMAVPGFREHGGLLPSPANVPP
ILSVPHRKHPHQSATARVPYGPRLAGGYNRSGHRGPRNKPVLPSGEAPTETNTSAPRVMN
PNAPEFVPGQSRSPNGHPASPNGPLTSPGGIPSSPQGLPSSPDSTVESPVTASPQVSECG
QTNSEGNDASSGINVEAGGETQTTDDTSHTESKDGEVEPEQTTAPEVAEEAVAAKDVTEE
LIATGQPKSWADYSDGEVEAVEVAG
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaaggcagggaaggccaagcccaaggccaagggcgacaagaagaagaaagag
gagaaagtgttgcccaccgtgctggacgtcaccgtcgagacgccggactacacgcagctc
acgctcaagggcatgtcaacggacaggatcctcgacatccggaagctcctggccgtccac
gtggacacatgccatctcaccagttattctctgtcccacgaggtccgtggggcccagctc
aaggacacggtggaggtcgcctccctcaagccctgccacctcagcatcgtcgaagaggac
tacacggaggagctcgccgtcgcgcacgtgcggcggctgctcgacatcgtcgcctgcacc
accgcgttcggcgcgaagaagcccgaccagaagcccgcttcccccaatgcggccgcggcc
gcggcagaggctgccaagcccgagtcgcccgggaagacggcgcccggcggcggaggaggc
ggtgaggagcccatgtacccgccgccgaagctggggcagttttacgacttcttcacgttc
tcgcacctcacgccgcctctgcattatattcggagatcgacgcgcccattcgttcatgac
aagagagaggatgacttcttccagatcgatgtaagagtttgtaatgggaaaccagtgacg
attgtggcatcccaagcaggattctaccctgcaggaaagcgtgcactcatcagccgctcc
cttgttggactactgcagcagacaagccgtgcatttgatggagcttacaaggctctgatg
aaggcatttgtcgagcacaacaagtttggaaatcttccttatgggttccgatcaaacacc
tgggtggttcctcctgttgtagccgattcaccatcagtgttcccacctcttccaactgaa
gatgaaacttggggtggcaatggtggaggtcaaggaagagacggaaagcatgaccataga
ccatgggtgaaagaatttgccatccttgctgcaatgccttgcaaaacagctgaggagagg
caagtcagagacagaaaggctttcatactccacagtttatttgtagatgttgccgtcctc
aaagctgttgcatctattcagcaactgatttccaaccatacaagttcacacgaaatagca
aatggcaccacaggtccagtcttgcacacagagcaagttggtgatatgaaaatagcgatc
acaaaggacaaagcagacgcaagttccaagttagatgttaagttggatggaagtcaggct
ccaggaatgtcttctgatgagcttgctcagagaaacttgttgaaaggcatcactgctgac
gagagtgcaacagtacatgacactgctactcttggtgtggtcattgtaaagcattgtggg
tatacagctgttgtccaagttccagtgcatactgatctgacaactacttctctagcacag
caggacatccacattgaagatcagcctgaaggaggtagcaatgctcttaatgtcaatagt
ttaaggatgctgctccataaatcatgtgcccagtcatctggaggagttcagcgattgcag
agctgtgatcctcaagacaatgagactactcaaaattttgtccggaagattctgacagac
agcttgcaaaagcttgaaagtgaggctccaatggtaacaagaccgatcagatgggaactt
ggtgcttgctgggtacaacatctacagagccaggcttctgagaagacagaaactaagaaa
agtgatgagactaaggatgttccaacagtaaagggcctgggtaaacaatttggtcagtta
aaggagataaaaaagaagacagatgacaagagtggaaaaggttcttatgcaaaagaaaac
agttcacctaatacatataatgcacatactgacaacactaccagtgcaaaggaggataaa
gaggctgttcttcagggactgcttccagaagcagctttccaaaggctaaaggaatctgaa
actggacttcatgctaagtcactggacgaattgattgagatggcacacaagtattatgat
gacactgccctgccaaaattggtagcagactttggttcacttgagctttcccctgttgat
ggaaggacactgacagattttatgcacactaggggccttcagatgcggtcactgggacga
gtggttgaactttctgataagctcccacacatacagtccttgtgtatacatgagatggta
gttcgagcatttaagcacatacttcgggctgttattgcagcagttgatgatgtaaatgac
atggctgactcaattgcatcatgtttaaacattttgctgggaccattcccagaagaaaac
aatggcaattgtggagaggatcataatctcaggaaaaggtggctggaggtctttctaata
aagagatttgaatggaagtggaaagatgaatattcacttgatctaagaaaatatgccatt
ctacgtggtctctgccataaggtaggacttgagttagtaaccaaagattatgacatggat
atgccacatccattcagaaagtcggatattatcggtgtcgttcctatctacaagcatgtt
gcatgctcatcggctgatggccgcaccctgctggagtcatccaagactttcctcgataaa
ggaaaacttgaggatgctgttaactatggcacaaaggctcttgcaaaactagttgctgtt
tgtggcccatatcaccgaatgaccgcaggagcatacagccttcttgcagtagtgctttat
catactggcgatttcaaccaggcagctatctatcaacagaaggctttagatattaatgag
agggaacttggacttgaccacccagatacaatgaaaagctatggagatcttgctgttttc
tactatcgcctgcagcatacagaactggccctaaaatatgtgaatcgtgctctatatctt
ttgcacctcacatgtggcccttctcatcctaacactgctgcaacttacatcaatgtcgca
atgatggaagaagggttgggtaatgtccacgttgcacttcgttacctgcacgaagctcta
aaatgcaaccaacgtttgcttggtgctgatcacatacagactgcagctagttatcatgct
attgctattgctttgtctttaatggaagcatactcgttgagcgtccaacatgaaaagact
actttaagaatacttcaagcaaagcttggatcagaagatcttcgaacccaggatgctgct
gcttggttggaatactttgagtctaaggcactagagcagcaggaagcagcacgtaatggt
actccaaagcctgatgcttcaatagcaagcagaggacatctgagtgtatcagatctatta
gattatatcaatccagatgatgagctcaaggctaaggaaatgcaaaagaaacaagcccgt
gctaagatcaaaggccgcactgggcaaaacccatctgacctggttgacgatgaagatcaa
agaagccctctacctaacaatgataatttattaactgagaaggaagactctggagttaaa
gagaatggaacctttgttgagcatgtgaaagtgaaagatgaaataccaagtgacactaca
atccacatacctcaagatgatttcattgaagagtacacatctgatgaggggtggcaagca
gctgttccaaagggacgatccacagggagccgcaaaactggttcaggcacaaggaagcca
aatctggcgaaactcaatactaatgtatttcacagtgagaatggaagatacaaaggaagg
gttccatccaacttctcttcccctcgagttgcaccaaatgagactgtagctcctgttgca
tctagtcctcttgcaaagaaattagcgaagaattcaagcttcaattccaaagcagttagc
cctgctgtctcatcaagcagtggtgagaattcttccaatcccaactccaagccagcaagc
cctgccattactgcagctactgccaaggtgatacaatccacagcacctgctagtcaaact
gtaaggaagtcactttcatacaaggaagtggcaatagctgcaccaggaactcttgtcaaa
gcattgagtgaggtacatacagaagaaaaggatacaattgaccaaggtgcaagtgttgag
agtgctaagcctccaaaagaacgcaatggtcacccttctggagagaaagatggagcaaca
gaagtgtcgcaaaagggtgatacttcccaagtatcaaaatcaacagatggaggtaaatct
gagcaaactgatgtttttgctggttctcaaccagagccagaacacaaaaagacctcagat
gcaacagagatatctgtagtgaaaaagaccacagatcttgctgcctcagtcacatcatct
gcaacacaaactgaccctgacgctccaaatgtggaagcgcaaactgtaattgaggcaaac
gattcttcctccaatgatgatgaaagagatgtaggagaggatacaccagaacaactgtca
agtggaggggaaaatgagaaatcttcaccgtctgagagtgaaaagaaagagacaaccagt
aaactttctgctgcggcggctccattcaatccatccaccgtaccagcttttggttcaatg
gctgtaccaggttttagagaacacggaggactattgccatcaccagctaatgtaccccct
atcttgtcagtccctcaccgtaagcaccctcaccaatctgcaacagcaagggtcccttat
ggtccgcgtctggctggaggttacaacagatcggggcaccggggacctcgtaacaagcct
gtgttgccaagtggtgaagcacctacagaaacaaatacatctgcccccagagttatgaac
cctaatgctccagagtttgtaccaggccaatctcgtagtcctaatggacatccagcatct
ccaaatggtcctttaacatcaccaggtggtattccatcttccccacagggccttccgtcc
tctccagatagtactgtagaatcaccggtaactgcatccccacaagtttctgaatgtggc
cagaccaattctgaaggaaatgatgcatctagcggaatcaatgttgaggctgggggtgaa
acgcagaccacagacgacacaagccacacagaaagtaaagatggagaagtggagcctgag
cagaccacagctcctgaagttgcagaagaagcagtggcagcgaaagatgttactgaagag
ttaattgcaaccgggcaacccaaatcctgggctgactacagcgatggagaggtagaggct
gttgaggtcgcaggctga
DBGET
integrated database retrieval system