Panicum hallii (Hall's panicgrass): 112878841
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Entry
112878841 CDS
T07366
Name
(RefSeq) protein OPAQUE1
KO
K10357
myosin V
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112878841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112878841
04131 Membrane trafficking [BR:
phai04131
]
112878841
03029 Mitochondrial biogenesis [BR:
phai03029
]
112878841
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phai04812
]
112878841
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112878841
mRNA cycle factors
P-body specific factors
112878841
Membrane trafficking [BR:
phai04131
]
Others
Actin-binding proteins
Myosins
112878841
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112878841
Cytoskeleton proteins [BR:
phai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112878841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_10
AAA_16
CLZ
Flp1_like
Zeta_toxin
AAA_22
Chordopox_RPO7
ABC_tran
SICA_beta
Motif
Other DBs
NCBI-GeneID:
112878841
NCBI-ProteinID:
XP_025798860
LinkDB
All DBs
Position
1:57195812..57213903
Genome browser
AA seq
1525 aa
AA seq
DB search
MSYRKGSKVWVEEKGEGWVEAEVTEAKERAVVVLTSQRKKITVLPEKLLPRDTDEDLGGG
HVDDMTKLTYLNEPGVLYNLKKRYALNEIYTYTGSILIAVNPFTRLPHLYNEYMMEQYKG
VRLGELSPHVFAVADASYRAMVNESRSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAL
DDRTVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDASGRISGAAIRTYLLERS
RVVQITDPERNFHCFYQLCASGKDAELYKLGHASSFHYLNQSKTYDLEGTNNVDEYWKTK
RAMDIVGISRKDQDAIFRTLAAILHLGNIEFAPGKDSDSSKIKGSTSNFHLQMAANLFMC
DADLLVSTLCSRSIHTREGIIIKALDCPAAAANRDALAKTVYARLFDWLVENINKSIGQD
VDSKVQIGVLDIYGFESFKNNSFEQFCINFANEKLQQHFNEHVFKMEQEEYKSEEINWSY
IEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFATKMFRNFSSHPRLEKTKFSET
DFTISHYAGKVTYQTDSFLEKNRDYIVAEHCNLLSSSRCPFVSGLFTSLPEESIRSSYKF
SSVASRFKLQLSALMETLNSTEPHYVRCVKPNSANRPQLFENQSVLHQLRCGGVLEAVRI
SLAGYPTRRTYAEFVDRFAVLIPELMIGSYDEITLTKGILEKMKLDNFQLGRTKVFLRAG
QIAILDMRRAEVLDNAARHIQGRFRTFIARKEFVRTREASISVQAYCRGCLSRKMYAIRR
ETAAAVIVQKYVRRWLLRRAHLQACLSALLIQSYVRGFITRLYFSAIREHKAATVIQSTW
RRRKVVMLFQHYRQATVAIQCAWRQKLARRELRRLKMAANEAGALREAKNKLEKKMDDLA
LRLTLERRLRAASEESKSSEILKREKIIESLSAECAAAKSAAQIEHAKNLLLQRQLDESL
REITMLQSKRIITAEAEKENSNLKNLVESLSVKNSILEKELNVACKSSDDTMEKLKDVEG
KCNHLQQNLDKLQEKLTNLENENHVLRQKAFNTPPMNNLAVAPKTLSEKFSEISASTGLP
NCESKSTFDSPTPTKYLAPLPQTLTGSRRSRLPVERHEENHEILLRCIKENLGFKDGKPV
AACIIYKCLLHWRAYESERTAIFDHVIEAINDVLKGQEADGRLPYWLSNTSALLCLLQRN
LRSNGLFATPSRRSGALGLGGKLVQTLRSPSKLVGRSDSLPQVDARYPAILFKQQLTACV
EKIFGQLRDNLKKEISPLLNVCIQAPKSTRGQPGKVSKSPGVGAQPASNSNWDNIVNFLD
LLMDTLRENYVPSFFIRKLITQLFSFINIQLFNSLLLRRECCTFSNGEYVKAGLSLLEKW
ITDVTEEFAGTSWHELNYIRQAVGFLVIHQKRKKTLEEIRQDLCPSLSVRQIYRICSMYW
DDKYNTQGISNEVVAAMREVVNKDTQNLVSNSFLLDDDLSIPFSTEDLSMAIPAMDYAGV
DLPESLQHYTSVQFLLRQQDPQPVQ
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccgcaaggggtcgaaggtgtgggtggaggagaagggggaggggtgggtggag
gcggaggtgacggaggcgaaagagcgcgccgtcgtcgtgctcacgagccagcggaagaag
attacagttttgccagagaaattattgcccagggatacagatgaagatctgggtgggggt
catgttgatgacatgaccaaactgacttatctgaatgaaccaggtgttctttacaatctg
aagaaaagatatgcattgaatgagatatatacttacaccggaagcatcttgattgctgtt
aatccttttacgaggctacctcacctgtacaacgagtacatgatggagcaatataagggt
gtccgattgggggagttgagtccacatgtttttgcagtagctgatgcatcgtacagggct
atggtgaatgaatcccgaagccagtccatcctggttagtggtgaaagtggtgctggcaaa
accgaaacgactaagcttattatgcagtatctcacatttgttggtggtagagctgctctt
gatgatcgaacagttgaacaacaggttctagaatccaaccctcttttggaggcatttggc
aacgccaaaacagtacggaatgacaactcaagccgatttggaaaattcgtggagatacag
tttgatgcaagtggtaggatatctggagcagctattaggacctatcttttggaaaggtcc
cgtgttgtgcaaattactgatcctgaaaggaattttcattgcttctaccaattgtgtgct
tctggaaaggatgcagagctgtacaagcttgggcatgcaagcagttttcattacttgaac
caaagcaagacttatgatttggaagggacaaacaatgtagatgagtactggaagacgaaa
agagcaatggacatcgttgggattagcagaaaagatcaggatgctatatttcggacattg
gcagccattcttcatcttggcaatattgagtttgctccaggaaaagattctgattcctca
aaaattaagggttcaacttcaaattttcacctccaaatggcagctaatttatttatgtgc
gacgcagatctattggtctcaacattatgtagtcggtctatacatactcgtgaaggaata
attattaaagcattagactgtcctgctgccgcagctaatcgtgatgctctagcgaagact
gtatatgccagattatttgactggcttgtcgagaatattaataagtcaattggtcaagat
gttgattccaaggtacaaattggtgtcttggatatctacggctttgaaagcttcaaaaac
aacagctttgagcagttctgcattaactttgcaaatgaaaaacttcagcaacactttaat
gagcatgtattcaagatggaacaggaggagtacaaaagtgaggaaattaattggagctac
attgagttcattgacaatcaggatgtgctggatttgattgaaaagaaaccgattggaatt
attgcactgctggatgaagcttgcatgtttccaaaatctactcatgagaccttcgcaaca
aagatgttcagaaacttctcttcccatcctaggcttgagaagacaaaattctcagaaaca
gattttaccatctcacactatgctgggaaggttacatatcaaacggattcttttctggaa
aagaatcgagattatattgtcgcagagcactgcaatcttctatcatcttcaaggtgccca
tttgtttctggacttttcacttcgttgccggaagaatctataagatcctcctacaagttt
tcatcagttgcttccagatttaagctacaactgtcagccctcatggaaaccctaaactca
acggaacctcactatgtacgctgtgtgaagcctaactctgccaatcgacctcagcttttt
gaaaatcaaagcgtcttgcatcaactgcgttgtggaggtgtcttagaggctgtccgtatt
agtcttgctggctatcctaccagaaggacttacgctgaatttgttgatcggtttgctgtt
ctaatcccagagttgatgattggaagttatgatgaaataacgctgacaaagggaattctc
gaaaagatgaagcttgataattttcaacttggtagaacaaaggtattccttagggctggt
caaattgccatattagatatgcgtcgtgctgaggttttggacaacgctgcgcggcacatt
cagggccgtttcagaacatttatcgcacgcaaagaatttgtgagaacaagggaggcatca
atttctgtacaagcatattgcagaggctgtttgtcaaggaagatgtatgcgatcagacga
gaaacagctgcagctgtaattgttcagaagtatgtccgaagatggctgctacgccgagct
cacctgcaagcatgtttgtcagctttgcttattcagtcttatgttcgagggtttatcact
cgcctctatttctcagcgattagggagcataaggctgctacagtgatacagtctacatgg
agaaggcggaaggttgtaatgcttttccagcattacaggcaagccactgtggcaattcag
tgtgcttggagacaaaagcttgcaagaagggagctacggagacttaaaatggctgcaaat
gaagctggtgcattgcgtgaggcaaagaataagcttgagaaaaagatggacgatcttgct
ttaagacttacccttgaaaggagactgcgggctgccagtgaagagtcaaaatcatcagaa
atattgaagcgtgaaaaaataattgaatcattaagcgcagaatgtgctgctgctaagtca
gctgctcaaattgaacatgccaaaaacttgttgctccagaggcagttggacgagtctttg
agagagatcaccatgttgcagagtaaaagaattataaccgcagaagcagaaaaagaaaac
tccaacctaaagaatttagttgaatcattatctgtgaaaaactcaatactggagaaagaa
cttaatgtggcttgtaaaagtagcgatgatacaatggagaaattgaaggatgtggaggga
aaatgcaaccatctacagcaaaatttggacaaattgcaggagaaactcactaatttggaa
aatgaaaatcatgtcctaagacagaaggcatttaacacaccaccaatgaacaatctagct
gtagctccaaagacgttatctgagaaattttctgaaatttctgcatcaaccgggcttccc
aattgtgagtcgaagagtacatttgatagcccaacaccaacaaaatatctggctcctctt
ccgcagactttgactggatcacggagatcgaggttgcctgttgaaaggcatgaggaaaat
catgaaattttgttaagatgcatcaaagaaaatttaggttttaaagatggcaaaccagtt
gcagcctgtatcatttacaaatgccttttacactggcgtgcttatgaatcagagaggact
gctatttttgatcatgtaattgaggccataaatgatgtcctaaaggggcaggaagctgat
gggagattaccttattggttgtccaatacttctgcattgctatgccttctgcagaggaat
ctgcggtcaaatggattatttgctacaccatctcgtcggtctggagctctagggctaggc
gggaagctagtgcaaacgctgaggtctccttcaaagcttgtaggccgcagtgattctctg
ccacaagtggatgcgcggtatccagccatactattcaaacagcagcttaccgcatgtgtt
gaaaagatcttcgggcagctcagagataatctgaaaaaggaaatatcacctcttcttaat
gtttgcatccaggctccaaagtcaacacgtgggcaacccggaaaagtatccaagtcacct
ggggttggtgcccaaccggcatcaaattccaactgggacaacattgtcaatttcctggac
ttgcttatggatacattgcgagaaaattatgtgccatccttctttattcgtaaacttatc
acacaattattctccttcatcaatatacagttgtttaacagtcttcttctccggcgtgaa
tgttgtacattctccaatggggaatacgtgaaagctgggctatccttgttggagaaatgg
attactgatgtcacagaggagtttgcggggacatcttggcatgagctaaattatattaga
caagctgtcggttttttggttatacaccaaaaaagaaaaaagacacttgaggagatcagg
caagatctttgcccgtccttgagtgttcgccaaatctacaggatatgctcgatgtactgg
gatgacaaatacaatacccaaggcatatcaaacgaggtggttgctgcaatgcgggaagtg
gtcaacaaggatacccagaatcttgtgtcgaattcttttttgttggatgatgacttaagt
ataccattctccaccgaggatctgtccatggctatcccggcaatggattatgctggcgtc
gatcttccggaatctcttcagcactatacatcagtacagtttctactcaggcagcaggac
ccacagcctgtccaatag
DBGET
integrated database retrieval system
