KEGG   Panicum hallii (Hall's panicgrass): 112878871
Entry
112878871         CDS       T07366                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112878871
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phai04147]
    112878871
Membrane trafficking [BR:phai04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    112878871
Exosome [BR:phai04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112878871
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 PEP5_VPS11_N WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 TPR_12 Beta-prop_WDR35_TULP_N TPR_8 HEAT_GCN1 WD_LRWD1 Clathrin
Other DBs
NCBI-GeneID: 112878871
NCBI-ProteinID: XP_025798897
LinkDB
Position
1:complement(5808451..5818218)
AA seq 921 aa
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTDLPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKSVGVDNEIADGDRLPLAVKELGSCDLYPQTLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSRIKIYSKNFQ
EKKSIRPSFSAERIFGGVLLAMCTNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVM
RGDFDRANDVLSSIPKEQYDSVARFLESRGMLEEALEIATDTNYRFDLAVQLGRLEIAKA
IATEVQSESKWKQLGELAMSTGKLDMAEECLLHAMDLSALLLLYSSLGDADGITKLASVA
KEQGKNNVSFLCFFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIIALWKKDLQK
VNPKAAESLADPNEYPNLFDDWQIALNVEATVAPKRGIYPPAEEYMNHAERSSESLVEAF
KNMHVHEEALPDDIEDAVDEVVEDGGVEESQEDAVEVDAEDAEVEESQDDAVEVEAEGST
DGAVLVNGNSSEEQWVLTPEQ
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgccgctccggttggatatcaagaggaagctcgcgcagaggtcggagagggtcaagtcc
gtggatctgcatccgacagagccatggattttgtcaagtctgtactcggggagcgtttgc
atctggaactaccagacgcagacaatggtgaaatcatttgaagtcacggatttaccagtt
cgttcggccaaatttatttcacgaaagcaatgggtagttgctggtgccgatgatatgttc
atccgtgtgtacaattacaatacaatggataaggtcaaggttttcgaagctcatactgac
tacattaggtgtgtggctgttcatcctacccagccttttgtcctgtcgtcttccgatgac
atgctgattaagctatgggattgggataaaggctgggtgtgcactcaaatctttgaggga
cattctcactatgtgatgcaagtcacatttaacccaaaagataccaacacttttgctagt
gcctcccttgatcgcacaataaagatatggagccttggttctcctgaccctaactttaca
ctagatggccattcaaaaggtgtgaactgtgttgattacttcactggtggcgatcgacct
tacttaattactggctcagatgatcagaccgcaaaggtttgggattaccaaacaaagagc
tgtgttcaaacacttgaaggacatgcacataatgtgtctgctgtatgtttccatccggag
ctacctataataattactggctcagaggatgggacagttcgaatgtggcactctactacc
tacaggcttgagaacactcttaactacggccttgaacgagtttgggctttaggatatatg
aaggggtcaagaagagttgtgattggatatgatgaagggacaataatgataaaaattggc
cgtgaagttcctgttgctagcatggacagcagtggaaaaatcatatgggcaaagcacaat
gaaattcaaactgttaatatcaagagtgttggtgtagacaatgagatcgcagatggcgat
agattaccattggctgtgaaggagttgggaagctgcgacctgtacccacaaaccttaagg
cacaatccaaatgggagatttgttgttgtatgtggagatggagaatacataatatacaca
gcattagcatggagaaacagatcttttgggtctgcacttgaatttgtttggtcaactgat
ggagaatatgcagtcagagaaagcacctctaggataaagatctacagtaaaaatttccag
gagaagaaaagtataaggccatcattttccgcagaacgtatatttggcggagtgttacta
gctatgtgtacaaatgactttatttgcttctatgactgggcggagtgcaggttaatacgt
cgaattgatgtcaatgtgaagaatctttactgggccgacagtggtgacttggtaacaatt
gcaagtgacacatcattctacatattgaagtataatagggatgtagtttcatctcatttg
gatggagggggttcagttggtgaagaaggtgtggaagatgcctttgagctgcttcatgag
atcaatgaacgtgtccggactgggctatgggttggtgattgtttcatctacaataattct
tcatggcgacttaattactgtgtaggaggagaggtcacaaccttgtttcacttggatcgg
cctatgtatttattaggatatcttgcaaaccaaagccgtgtctatcttatcgataagcaa
tttaatgttgtggggtatactttactccttagtttgattgagtataaaacacttgtaatg
cgtggggattttgatcgtgcaaatgatgttttatcatctataccaaaggagcaatatgac
agtgtggcacgtttcttggaatcacggggaatgttggaagaagcccttgagatagcaaca
gacactaattacagatttgacctggctgtgcagcttggtcgacttgaaattgcaaaggcg
attgctactgaggtgcagagtgaatccaagtggaagcagctaggggagttagctatgtca
actggaaagcttgatatggcagaggagtgtcttctacatgctatggaccttagtgctttg
ttgcttttatattcatcccttggggatgctgacggtattacaaaattggcatctgtagct
aaagaacaaggaaaaaacaatgtttctttcctttgtttcttcatgctaggaaagttggaa
gaatgccttcaactgttaatagaaagcaatcgtattccggaagcagcattgatggcaaga
tcttatcttcctagcaaagtccctgagatcatagcattgtggaaaaaggatctccaaaag
gtaaaccccaaagcagcagagtcgctggctgaccctaatgagtacccgaacttatttgat
gactggcagattgctctcaatgtagaagctactgttgcccccaaaaggggtatctatcca
ccggcagaggagtacatgaatcatgccgaaaggtcaagtgagagtttagtagaagctttc
aaaaatatgcatgtacatgaagaggcgctaccagatgatattgaagatgctgttgatgag
gtagttgaggatggtggggtagaagagagtcaagaagatgctgttgaggttgatgctgag
gatgccgaagtagaagagagtcaagacgatgctgttgaggttgaggctgagggttcaact
gatggtgctgtccttgtgaatggaaatagtagtgaggaacagtgggtgctgacgcctgaa
caatag

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