Panicum hallii (Hall's panicgrass): 112878994
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Entry
112878994 CDS
T07366
Name
(RefSeq) DNA topoisomerase 2
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phai03032
]
112878994
03036 Chromosome and associated proteins [BR:
phai03036
]
112878994
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
112878994
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Topoisomerases
112878994
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
112878994
Centrosome formation proteins
Centriole proteins
112878994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Myco_19_kDa
HalOD1
Motif
Other DBs
NCBI-GeneID:
112878994
NCBI-ProteinID:
XP_025799092
LinkDB
All DBs
Position
1:complement(53164661..53171857)
Genome browser
AA seq
1481 aa
AA seq
DB search
MTGPLHSSSGHNAAAGGGGGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTQTLWVYEGG
AMVNRAVTYVPGLYKIFDEILVNAADNKQRDPRMDSLRVEIDVEGCCVSVYNNGDGIPVE
VHQEEGVYVPEMIFGHLLTSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETADGHRQK
KYKQVFSENMGKKSQPQITKCKQGENWTRVTFKPDLAKFNMTHLEDDVVALMRKRVIDMA
GTLGKTVKVELDGQKLSVKSFSDYVDLYMQSANSDRPAPLQRVYEKVNDRWEVCVTLSEG
QFQQVSFVNRIATIRGGTHVDYITNQIANYVMTIVNKKNKNANMKAHNVKSHLWVFVNAL
IDNPAFDSQTKETLTTRQGSFGSKCELSNNFLKNVEKIGVVSNVLSWADFKLSKELKKTD
GSKKSRISGIPKLEDANEAGGKDSDKCTLILTEGDSAKALAMSGIAEVGRDHYGVFPLRG
KLLNVREANHKQIMDNAEIQNIKQILGLQHGKQYDSTKGLRYGHLMIMTDQDHDGSHIKG
LLINFIHSFWPSLLKVPSFLVEFTTPIIKATKNKTTKSFYTIPEYEDWKRNLGASASSWT
IKYYKGLGTSTSKEGKEYFSDISNHKKDFVWVDDHDGNEIELAFSKKRIADRKQWLTNFQ
PGTYLDHREKRIKYRDFINKELILFSMADLQRSIPSMVDGFKPGQRKILFCAFKRNLVKE
TKVAQFSGYVSEHSAYHHGEQSLASTIVGMAQSFVGSNNINLFYPGGQFGTRAQGGKDAA
SARYIFTKLSHVTRSIFPKDDDILLNYLNEDGQSIEPSWYVPILPMVLVNGSEGIGTGWS
TYIPNYNPRDIVANLRRLLNDKSTVPMHPWYRGFKGSIVKSHNAKVAGATYTITGIIEAV
DSTTLRITELPIRRWTQDYKEFIESVTLDPKNKDKETFIEDCTMQGDSDDVYFVLKLTEE
NMNKVMEEGLVKKFKLTTTIGTSNMHLFDSDGKIRKYDTPEQILEEFYKLRLEFYDKRKK
TLLQNIKLDLKKLENKVRFIRCVVDNEIVVNNRKRADLFLELREKNFDPFPMKKKKAEPA
AVGAIEEEENEESPEAANGVDPSDYEYLISMAIGTLTLEKIQDLNAEREKLVNEVEELEN
TTPKSLWLRDLDTFEKDLDVLDQMDLAEEEERRMKREKNANKEGGKAGPKKQRKKAAVKL
PKVESDTEGDGAEPVVAKRGAQQKKPAKKVNGAGSDDEDYVAENAKPEQQKKKQTKKASA
PVDEDEDDMPTLKARIAAFTLNDSSPDSSAMETETTEEQNEDKGVKGPSRRGGGKKVSSS
LAVISDDEDDDVDFAMEVPEVQAQKKGRGRKTAAATQPKAAATRKRAPAKGKAMMLKTTE
DSNTSAPSPEKKVRKMRASPFNKKSGSILQRGSTASSCEITAEASPPSGSSAEPVAAPQP
RRTARATTSKPVYISESDPEDEVVEVTDDSDFDVDGDSDDE
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccctctccactccagctccggccacaacgccgccgccggcgggggcggcggc
aagaccatcgaggagatgtaccagaagaagacgcagctggagcacatcctgctgcgcccg
gacacctacatcggctcggtggagaagcacacccagacgctctgggtctacgagggcgga
gccatggtgaaccgcgcggtcacctacgtcccgggcctctacaagatcttcgacgagatc
ctcgtcaacgccgccgataacaagcagcgggacccccggatggactcgctccgcgtcgag
atcgacgtcgagggatgctgcgtctccgtctacaacaacggcgacgggatccccgtcgag
gtccaccaggaggagggcgtctacgtgccggagatgattttcggccacctcctcaccagc
agcaactacaacgacaacgagaagaagaccaccggcgggcggaacggatacggagccaag
ctcaccaacatcttctccacggagttcgtcatcgagacagccgacgggcatcggcagaag
aagtacaaacaggttttctctgaaaacatggggaagaagtcacagccccagattaccaag
tgcaagcagggggagaactggaccagggtcaccttcaagcctgatcttgccaagttcaac
atgacccatcttgaagatgatgttgtagccctcatgaggaagagagtaattgatatggcg
ggcactcttggcaaaacggtgaaggttgaattggatggccagaagttgtcggtgaagagc
ttctctgactatgtggacctgtatatgcaatctgctaacagtgacagacctgcccctctc
caaagggtttatgagaaagtaaatgaccggtgggaggtgtgtgttactctaagtgaaggg
cagtttcagcaggtcagcttcgtcaacagaattgcaaccataaggggtggaactcatgtt
gattatatcaccaaccaaattgccaactatgtgatgaccattgtgaataagaaaaacaag
aatgcaaacatgaaagcgcataatgtgaagagccatttgtgggtcttcgttaatgcactc
attgacaaccctgcattcgactcccagaccaaggagaccttgacaactcgtcagggaagc
tttgggtcaaagtgcgagctttctaataatttcctcaagaatgttgagaaaatcggtgtt
gtcagcaatgtcctttcctgggctgatttcaaactaagcaaagaacttaagaagactgat
ggaagtaagaagtcaagaatttctggcatcccaaagcttgaagatgcaaatgaagctggt
gggaaagactctgacaagtgcaccttgatcctgactgaaggagattcggcaaaagctctt
gctatgtcgggcatagctgaagttgggagagatcactatggtgtgtttcctctcagggga
aagcttctaaatgtgagagaagcaaaccacaagcaaataatggataatgccgaaattcag
aacataaagcaaatacttggtttgcagcatgggaagcagtatgacagcaccaaaggcttg
agatacggtcatctcatgataatgacagatcaggaccacgatggttcccacatcaaaggg
ttgttgatcaacttcattcactcattctggccatctcttcttaaagttccatctttcttg
gtagagttcaccactccaattatcaaggcaacgaagaacaaaactaccaaatcattttac
acaataccagagtatgaagactggaaaaggaacttaggagcaagtgcaagttcttggacc
ataaaatactacaaggggttgggaacaagcacatccaaagaaggtaaagaatacttttca
gatatcagcaaccacaagaaggattttgtctgggtagatgatcacgatggcaatgaaatt
gagttggcattcagcaagaaaaggattgctgataggaaacagtggcttacaaactttcag
cctggaacttaccttgaccaccgtgagaaaagaatcaagtaccgtgatttcatcaacaaa
gagctgattctcttctcgatggcggacctgcagcgatcaataccttcaatggtagatggc
tttaaaccaggtcagaggaagatcctgttttgcgcattcaagaggaaccttgttaaggaa
actaaggttgctcagttctctggttatgtgtcagaacactcagcataccaccatggtgag
cagagtttagcaagtacgattgttggaatggctcagagttttgttggcagcaataacata
aaccttttttaccctggaggccagttcggtaccagagctcagggaggcaaagatgctgcg
agtgctaggtacatcttcaccaaactgtcacatgtcacacgttcgattttcccaaaggat
gatgacattcttcttaactatctgaacgaggatgggcagtcgattgaacccagctggtat
gtgccaatccttccaatggttttggtcaatggaagtgaaggaattggtactggatggagc
acatatattccaaactacaatccaagagacattgttgctaacctcaggcggttgctgaat
gataagtctactgtaccaatgcatccgtggtacagagggttcaagggttctattgtgaag
tcacataatgcaaaggtagctggtgccacgtataccatcaccggcatcatagaagctgtt
gacagcactacattgaggattactgaactgccaattcgccgttggactcaggattacaaa
gaatttatagaatctgtgactctagatccaaagaacaaagacaaggaaacatttattgag
gactgcacaatgcaaggtgatagtgatgatgtttactttgtgctcaaactaactgaggag
aatatgaataaggttatggaagaaggactggtgaagaaatttaagctgacaacaacaatt
ggaacatcaaacatgcacttgtttgactcagatggtaaaattcggaagtatgacactccg
gagcaaatacttgaagagttctataaattaaggcttgaattctatgataagagaaagaaa
acattattgcaaaatatcaagctggacttgaagaagcttgaaaacaaagtaaggtttatc
cgctgtgttgttgacaatgaaattgtagtaaataacaggaagagggcagatctatttctg
gagcttcgggagaagaattttgatcctttcccaatgaaaaagaagaaagctgaaccagct
gccgtaggagctatagaagaggaggaaaatgaagaaagtcctgaagctgcaaatggagtt
gatcctagtgattatgagtatctcatctcaatggcaatcggtaccttaactttggagaag
atacaggatctcaatgctgagagggagaaattagtgaatgaagttgaggaactggagaac
accacaccaaaatcgctttggttgagagaccttgacacctttgagaaagacctggatgtg
cttgatcaaatggatctagcagaggaggaggaaaggagaatgaagagggaaaagaacgcc
aataaggaaggtggtaaagctggccccaagaaacaacgcaagaaagctgcagttaaactg
ccaaaagtggaaagtgacacggaaggagatggtgctgaacctgtggttgcaaagcgtgga
gctcaacagaaaaaaccagccaaaaaggtgaatggtgctgggtctgatgatgaagattat
gtagctgaaaatgcaaaaccggaacaacaaaagaagaaacaaactaagaaggcaagtgct
cctgtggatgaagacgaagatgacatgcccacactaaaagcccgcattgcagcttttact
ctcaatgactcctctccggatagttctgccatggaaactgaaacaacagaagagcagaat
gaagacaaaggagtgaagggaccaagcagaagaggtggaggaaagaaggtatcatcatcc
ttggcagtgatatctgatgatgaggatgacgatgtagactttgccatggaagtcccagaa
gtccaagctcagaagaaaggcagaggaaggaagaccgctgctgctacacagccgaaggct
gctgccaccaggaagagggcgccagcgaagggcaaggccatgatgctcaagaccacagag
gacagcaacaccagcgctccatctcctgagaagaaagtccggaagatgagggcgtctcca
ttcaacaagaagagtggctcaatcttgcagagaggctctaccgcatcaagctgtgaaatt
actgccgaggcttcaccaccctctggcagctctgcagagccagtggctgccccgcaaccc
aggaggacagccagggccaccaccagtaagcctgtctacatctctgagagcgaccctgag
gatgaagtggtggaggtaactgatgattctgacttcgacgtggatggcgactctgatgac
gagtga
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integrated database retrieval system
