Panicum hallii (Hall's panicgrass): 112879013
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Entry
112879013 CDS
T07366
Name
(RefSeq) protein argonaute 1C-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112879013
03036 Chromosome and associated proteins [BR:
phai03036
]
112879013
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112879013
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112879013
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112879013
microRNA pathway
RISC loading complex
112879013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
112879013
NCBI-ProteinID:
XP_025799114
LinkDB
All DBs
Position
1:complement(59758622..59765840)
Genome browser
AA seq
1034 aa
AA seq
DB search
MGSRRGRQQQHHAAAEGSQPPHPQPAAAGRGGRAQQAPQRGGRGGNQGRPSPVHEAHHQQ
PRGRPGEHPARGHARGGTGTRPQQYPRAGAATGGQGSSTGSSSPLAPELRQAMEAPHALP
QASPLQAGPSQSPPEIQPMEERKLEATAGHQVVPAIPSSTKSLRFPLRPGKGSVGTSCLV
KANHFFAELPDRDLHQYDVSITPEVTSRVLSRAIIKELVNLHKQSYLGGRLPVYDGRKSL
YTAGPLPFTSQEFHITLLDDDDGSGSERRRREFKVVIKFAARADLHRLQLFLAGRHAEAP
QEALQVLDIVLRELPSARYAPFGRSFFSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSL
NIDMSATAFIEPLPVIEFVAQLLNSDIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRK
YRISGLTTQATRELTFPVDEGGAMKSVVQYFQETYGFAIQHTYLPCLQVGNQQRPNYLPM
EVCKIVEGQRYSKRLNQNQIRALLEETCQHPRVRERNIIQMVKHNAYEKDDYAQEFGITI
SDRLASVEARILPAPRLKYNETGREKDCLPRVGQWNMKNKKMVNGGKVSSWICVNFARNV
QESVVREFCHELALMCQASGMDFAREPVLPPLYARPDQVERALKARYHDAMNVLGPQRRE
LDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQILANLALKINVKVGG
RNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLV
SAQAHRQELIEDLYKVCQDPQRGTVSGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQF
YQVLLYELNAIRKACASLEANYQPKVTFVVVQKRHHTRLFAHNHNDQNSIDRSGNILPGT
VVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCYTYARCT
RSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVASGPAGRGPQSASRSTRAPGGSAVRPL
PALKDNVKKVMFYC
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggaggggaaggcagcagcagcatcatgctgctgccgagggctcacagcct
ccgcacccgcagcctgctgctgctggaagaggcggtcgtgctcagcaggcaccgcaacga
ggaggtcgtggagggaaccaggggcgcccatctcctgttcacgaggcccaccaccagcag
ccaaggggtcgccctggagagcatccggccaggggacatgctcgcggtggaactggaacg
cggccgcaacagtacccgcgtgctggtgctgctacgggtgggcaggggtcatccacagga
tcatcaagccctttagctcccgagctgcgccaagcaatggaagctccacatgcgcttcct
caagcctcaccactgcaggcaggtccttcacaatcaccacccgagattcagcccatggag
gagcgcaaactcgaggctactgcaggccaccaggttgtgcctgcaattccctcctcaacc
aagtccctcaggtttcctttgcgcccaggaaagggtagtgttggcaccagctgtttggtt
aaggccaatcatttctttgccgaacttccagacagggatcttcatcagtacgatgtctca
atcacaccggaagttacatcacgagttcttagtcgagccataatcaaggagctggtgaat
ctccacaagcaatcttacttgggtgggcggcttccagtctatgatggtaggaagagcctg
tacacagccggcccgctgccgtttacttcccaggaatttcatatcactttacttgatgat
gatgatggctctggttccgagaggcgacgtagggaatttaaggtagtcattaaatttgct
gcacgagccgacctccaccgtctccagttgtttttagctgggaggcatgcagaagctcct
caagaggcactgcaagttcttgatattgtgctgcgggagctgccttctgcaagatatgca
ccatttggccggtccttcttttcgcctgacttaggccgaaggcagcccctcggtgatgga
ttagaaagctggaggggattttaccagagcattaggcctactcagatgggcctctcactg
aacatcgatatgtcagcaacggctttcattgagccattacctgtaattgaatttgttgca
caactgctcaattctgacattcactctaggcccctctcagatgcggaacgtgtgaagatc
aagaaggccttgagaggagttaaggtggaagttactcatcgtggcaacatgcggagaaag
tatcggatatctggattaacaactcaggcgactcgagagttaacttttcctgttgatgaa
gggggtgcaatgaagtcagttgtacaatactttcaagagacatatggctttgccatccaa
cacacctaccttccttgccttcaagttggcaatcaacagcgtcctaattacttgcctatg
gaggtctgcaaaatagtggaaggacagaggtactctaagagattaaaccaaaatcagata
agagctcttttggaggagacatgccagcacccacgtgttcgtgagcgcaatataattcag
atggttaaacataacgcctatgagaaggatgattacgcgcaagagtttggcattacgatt
agcgatcgtctggcatcagtagaggcacggattttaccagctccacggcttaagtacaac
gagactggccgggagaaggattgcttacctagagttggtcagtggaatatgaagaacaag
aaaatggtaaatggtggtaaagtcagtagctggatatgtgtcaattttgctcgcaatgtg
caagagagtgttgttcgtgagttctgtcatgaactcgcactgatgtgccaagcgtcagga
atggactttgctcgggaacctgttcttccacctctatatgcacgtcctgatcaagtggag
cgagctctaaaagctaggtaccatgatgccatgaacgttcttggaccccaacgcagggaa
cttgatttacttattggaatactacctgacaataacggctcactttatggtgacttgaag
cgtgtatgtgaaatagatcttgggatagtttcgcagtgctgttgtacaaagcaggtgttc
aaaatgaacaaacaaattcttgcaaatcttgctctgaagataaatgtcaaggttggaggc
aggaacaccgtactggtagatgcagtctcaaggcggattcctctggtaactgacagacct
acaattatatttggtgctgatgtgactcatcctcatcctggagaggacagcagtccttca
attgctgctgttgtggcctcccaagattggccagaagtgacaaagtatgctggattagtt
tctgctcaagctcatcggcaagaattgatagaggatttatataaggtctgtcaagaccca
cagagagggacagttagcgggggaatgataagggagctacttatatccttcaaaagatca
accggggagaagccccagcgaataatattttacagggatggtgttagtgaaggacaattt
taccaagttctgctgtatgagctcaatgcaatccgaaaggcctgtgcctccctggaagca
aactaccaacctaaggtgacttttgttgtggttcagaagcgccatcataccagattattt
gctcacaaccacaatgatcaaaattcaattgacaggagtggaaacatactcccaggtacg
gtcgttgattcaaagatctgccatcctactgaatttgacttctacttgtgcagccatgct
ggcattaagggcactagccgtccagctcattatcatgtcctgtgggatgagaacaacttc
tctgctgatgagttgcagactcttaccaacaacctctgttacacttatgcaaggtgcacg
cgctctgtatcaatcgttccaccggcatattatgctcacctggctgccttccgtgctcgt
ttctacatggaaccagagacctcagacagtggttctgtggcaagtggtcctgcaggccgt
ggaccgcaatcagcatcccgtagcactcgggcccctggtggttcagctgttaggccactt
ccggctctgaaggataacgtaaagaaggtcatgttctactgttga
DBGET
integrated database retrieval system
