Panicum hallii (Hall's panicgrass): 112879016
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Entry
112879016 CDS
T07366
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00531
Glycosaminoglycan degradation
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112879016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phai00536
]
112879016
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
112879016
Glycosaminoglycan binding proteins [BR:
phai00536
]
Heparan sulfate / Heparin
Enzymes
112879016
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112879016
NCBI-ProteinID:
XP_025799117
LinkDB
All DBs
Position
1:58206300..58210642
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AA seq
538 aa
AA seq
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MAAGLLLKVVGFCVWALFWLGGTATVSTTALAGGDAVVVDARSAVAATDDDFICATLDWW
PPDKCDYGTCSWGLATLLNLNLSNKILLNAVKAFSPLKLRLGGSLQDMLIYETGDSGQPC
TPFVKNTSAMFGFSQGCLPLHRWDELNAFFQKSGAKIIFGLNALNGRIPMPDGSLGGPWN
YTNAASFIRYTVNKGYDIHGWELGNELSGSGVGARIDADQYAADVINLKHIIDSTYQGNP
SKPLVLAPGGFFDAAWFTELVSKTKPGQMDVITHHIYNLGPGVDDHLIEKILNPSYLDGE
ASTFSNLQGILKSAGTSTVAWVGEAGGAYNSGHHLVTDAFVFSFWYLDQLGMSSKYDTKT
YCRQTLVGGNYGLLNTTTFEPNPDYYSALLWHRLMGTTVLSTTFNGTNKIRAYAHCAKNS
QGITLLLINLSGNNTNRIYVTSEGAQAQSARKEGRRFSHIPGLGEAAELTREEYHLTPKD
GNLQSQQVLLNGNVLATDANGDIPKLEPVQVEGTQPITVVPYSIVFAHIPSFYAPACR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgggcctgctgctcaaggtggtcgggttctgcgtctgggccctcttctggctc
ggcggcaccgccaccgtgagcaccacggccctcgccggcggcgacgcggtggtcgtggac
gcgcggtcagccgtcgcggcgacggacgacgacttcatctgcgccacattggactggtgg
ccgccggacaagtgcgactacggcacctgcagttggggcctcgccaccctcctcaacctg
aatctctctaacaaaatcctgctgaatgccgtcaaagcattctcccctctgaagctccgt
ttgggcggctctttgcaagatatgttgatatatgagaccggtgactctgggcaaccatgc
actccattcgtgaagaacacgtccgcgatgttcggtttctcgcaaggttgcctaccattg
catagatgggatgagctaaatgctttcttccaaaaatctggggcaaaaattatttttggg
ttgaatgctctgaatggccggatcccaatgcctgatggttctttaggggggccatggaat
tacacgaacgcagcttcttttattcgctacactgtcaacaaaggctatgatatccatgga
tgggagctcggaaatgaactcagtggtagtggagttggagcccggattgatgcagaccaa
tatgcagcagacgtgatcaatctgaaacacatcattgacagcacctaccaaggcaaccca
tcaaagcctctagtacttgcaccaggaggcttctttgacgcagcctggttcactgaactc
gtcagcaaaacaaagccaggtcaaatggatgtgatcactcaccatatctacaatttaggc
cctggtgttgatgaccatcttattgagaaaattctcaatccatcttaccttgatggcgag
gcaagcacgttcagcaatcttcaggggatactgaagtctgcagggacgtccacagttgcc
tgggttggcgaagctggaggggcttacaacagtggtcaccaccttgtaactgatgcattt
gtgttcagcttctggtatctggatcagcttgggatgtcatcaaagtatgacacaaaaact
tactgtagacagaccttggttggtgggaattatggcctgctcaacacaactacatttgaa
ccaaatcctgactattacagtgctttactatggcatcgcctcatgggaaccacggtcctc
tcgacgacattcaatggcacaaataagatccgtgcttatgcacattgcgcgaaaaattcg
caagggattactctgctcctgatcaatctcagtggcaacaatacaaaccgcatttacgtg
acgagcgaaggtgcccaggcccagagtgcaaggaaggagggcagaaggtttagtcacatt
cctggtcttggtgaagcagccgagcttacaagagaagagtaccatctcactccgaaagat
ggaaacttgcagagccaacaagtgttgctgaatggcaatgtgttggcaactgatgccaat
ggagacatcccaaagctggagccagtgcaggtggagggaacacagcccataaccgtggtt
ccttactccattgtgtttgctcacatccccagcttctacgctcctgcctgtaggtag
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