Panicum hallii (Hall's panicgrass): 112879292
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Entry
112879292 CDS
T07366
Name
(RefSeq) cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112879292
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phai01007
]
112879292
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112879292
Enzymes [BR:
phai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
112879292
Amino acid related enzymes [BR:
phai01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112879292
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112879292
Prokaryotic type
112879292
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
tRNA-synt_1
DALR_2
DUF6825
RSS_P20
Motif
Other DBs
NCBI-GeneID:
112879292
NCBI-ProteinID:
XP_025799300
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Position
2:complement(49345457..49351599)
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AA seq
570 aa
AA seq
DB search
MAAAARRAAGLLPLLLPSPSGARTQFRRAISLISPPRSYRLLSHPARPFSTSPFSASASA
SNGAAAERTRELHLYNTKSRKKEHFRPRAPDGEVGMYVCGVTPYDDSHIGHARAYVAFDV
LYRFLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPS
VEPRVSDHIDHIINMIKQILDNNCAYVVGGDVYFSVDNFPEYGELSGRKLDDNRAGERVA
VDERKRNPADFALWKAAKDGEPWWESPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL
IFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALR
MFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEESCQQQHKNSGDSLPASTLNYIQ
KLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLATLEEKIRVVL
SVLGLLPSSYHEALQQLREKALRRASITEERVLQKIEERTAARKAKQYEKSDEIRKELAA
VGIALMDGPDGTTWRPSVPLSEEEAEVVKT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgaggcgtgccgctggccttctccctctcctcctcccttcgccgtcc
ggtgctcgcacacaattccgccgggcgatatccctgatctccccgcctcgctcctatcgc
ctgctctcgcaccccgccaggcccttctctacctcccccttctccgcctccgcctccgcg
tcgaatggcgcggctgcggagagaacccgcgagctgcacctgtacaacaccaagtcgagg
aagaaggagcattttcggccgcgagctcctgacggggaggtcggcatgtacgtctgcgga
gtcacaccctacgacgacagccacatcggccatgcccgcgcatacgtcgcctttgacgtc
ctctacaggttcttgcgttatttggactatgaagttcgctatgttcggaacttcaccgac
attgatgacaagataattgctagagcaaatcagctgggggaagatccttttagcttaagc
aaaaggttctctgatgatttcctgtcagacatggctaatcttcaatgtttaccaccatct
gtggagccccgtgtttcagatcatattgatcatattataaatatgattaaacagatcctt
gataacaattgtgcatacgtagtgggtggggatgtctatttctctgttgacaattttcct
gaatatggagagttatctggtcgaaaacttgatgataatagagctggtgaaagggttgca
gttgatgagaggaagagaaatccagctgattttgctctatggaaggctgcaaaagatggg
gagccatggtgggagagcccttggggccctggaaggccaggttggcacatcgaatgcagc
gccatgagtgcacattacttgggtcattcttttgacatacatggtggtggggaagacctc
atctttccacaccatgagaatgagatagcacagagccgtgcagcatgttgcgacagtagc
ataaattactggatacacaatggttttgtcaatgtaaatagtcaaaaaatgtctaaatca
cttggtaacttcgtcaccatacgcaaggttatagagatgtaccacccgcttgccttgaga
atgttcttacttggcacacactacaggtctccaatcaactacacaatagaacaactcaat
gttgcttcagatagattgtattacacgtatcagacgttacgagattgtgaagagagttgc
cagcagcaacataagaactctggagactccttgcctgctagtaccctaaattatatccag
aaacttcatgatgaatttgagacttcaatgtcagatgatctccacacttcagtagcattg
gctgctatttctgaaccattgaaagtgatgaatgatttgttgcacactcgtaagggaaag
aagcaggaaaaacgattggaatcacttgctaccttggaagagaaaataagagtagtgctc
tctgttctaggattgctgccttcaagttatcatgaggctctgcaacaactgcgggagaaa
gcattgagaagagcatccatcaccgaggagcgtgtgctgcagaagatcgaagagaggact
gcagcaaggaaggcgaagcagtacgaaaaatctgacgagatccggaaagaattggctgct
gttggaatcgccctcatggatggtcctgacggaacgacttggagaccatctgtgcctctt
tctgaggaggaagcggaggttgtgaagacatga
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