Panicum hallii (Hall's panicgrass): 112879554
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Entry
112879554 CDS
T07366
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112879554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112879554
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112879554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1499
Motif
Other DBs
NCBI-GeneID:
112879554
NCBI-ProteinID:
XP_025799612
LinkDB
All DBs
Position
2:complement(44580258..44584142)
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AA seq
488 aa
AA seq
DB search
MAFSFASPAASNPFQTPAASNPFQTPSASNPFQTPAAPNPFQTPAPATTQAPSSSPSPFQ
FSFQQPQLQQPQQQVAPAAQPQPQPQQQQQKLMLYTTDMKPAVYNTKWEELHAESQKALL
QIEDKIREYKDESERLDQCSRLYDSSISNVNFELDASHIAQELGGTTIVMEREKASIQEL
MTVVNEMMWNTEFAMRSYMMLRPSFVRPGAGVANGGSSNPSAGAPPNQPVVYFYSGVPKR
PSVFMQHTVNRFECYLAECCKWISELEQLVQTENNKRSSDSLESLPKVMSNVHDYFIYVT
SKVENLHQYVESMKTEYLNEQRRMGKRNDPFLEANRREAAKQEAAARRVHPTLHLPAPAP
VQPTTQLAAPAGSQPQQSSFPSSVTSSSGFSAFITPASAPSSSSLFATPTTPAPSGGLFG
TSGSAQLTTPFGTASTPTLASTPAPGFGTSTSLGGTSLFSTPFGGGATASGSSFGGASKG
RSKPRGRR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctccttcgcctcgccggcggcgtcaaatccgttccagacgccggctgcgtcg
aacccgttccagacgccgtcggcgtcgaaccccttccagacgccagcggcgccgaacccc
ttccagacgccggccccggccacgacgcaggcgccgtcctcctcgccctcgccgttccag
ttcagcttccagcagccgcagctgcagcagccacagcagcaggtggcgccggcggcgcag
ccgcagccgcagccgcaacaacagcagcaaaagctgatgctgtacacgacggatatgaag
cccgcggtgtacaacaccaagtgggaggagctgcatgccgaatcgcagaaggcgctgctc
cagatcgaggataagatacgggagtacaaagatgagagtgagaggttggatcaatgcagt
cgtctttatgactcctcaatctcgaatgttaattttgagcttgatgcgagtcacattgct
caggagcttggagggaccaccattgtgatggagagggagaaggcttctattcaagagttg
atgactgttgtcaatgaaatgatgtggaatacggaatttgctatgaggtcatatatgatg
ttgaggccaagtttcgtccgtccaggtgctggagttgcaaatggtggttcttcaaatcct
tctgctggtgctccacccaatcagccagtggtatatttctacagtggagtcccaaagcgc
ccttccgtttttatgcagcatactgtcaataggtttgagtgttatctagcagagtgttgc
aagtggatcagtgagctagagcagctggttcagacggagaataataaaagatcatcagat
tctctagagtctcttccaaaagttatgtcaaatgtgcatgactacttcatctatgttact
tctaaggtggaaaatcttcatcagtatgttgaatcaatgaaaactgaatatcttaatgaa
cagcgtcgtatgggtaagaggaatgatccatttctggaggcaaacagaagagaagcagct
aaacaagaagcagctgccagaagggtccatccaactttgcatttgcctgctcctgctcct
gtacagcccacgacacaacttgctgcaccagcaggaagccaaccacagcaatcttctttt
ccttcttccgtgacttcatcaagtggtttttcagcttttatcactccagcttctgcgcca
tcctcgtctagtctctttgcaactccaacaactccagctccgtcaggcggcctttttggt
acatctggatcagctcaattgaccacgccatttggaacagcctccactcctacactagca
tcaacaccagcgcctggatttgggactagcacatctttgggtggaacatcactattttct
acaccatttggaggtggggcaacagcttcaggttccagcttcggtggtgcatcgaaaggg
aggtcgaagccccgggggcgtcgctag
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