Panicum hallii (Hall's panicgrass): 112879605
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Entry
112879605 CDS
T07366
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112879605
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112879605
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
112879605
NCBI-ProteinID:
XP_025799730
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Position
2:47764299..47768259
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AA seq
635 aa
AA seq
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MGVGGSFWDLLKPYARHEGAGYLHGRRVAVDLSFWVVSHSTAIRARSPGARKPHLRNTFF
RTLSLFSKMGAFPVFVVDGQPSPLKSQARAARFFRGSGMDLAALPSTETESSGAATPVKG
RNAAFTRCIEECVELLEYLGMPVLWAKGEAEALCAQLNNEGHVDACITADSDAFLFGAKI
VIKVLKSNCKEPFECYNIADIEAGLGLMRKQMVAMALLIGSDHDLHGVPGLGLETALRFV
QLFDEDEVLDKLREIGRGLYPFLEGLDNPHIDDLPSSSTKGSIVKSLHCSHCGHPGSKKN
HSKVGCNYCLVDALENCVEKPAGFKCECPSCEKARDLKEQRKHENWQIKVCRRIAAETNF
PNEEIIKLYLSDDNLDKEKGVPLLSWNKPDVEALVDFLTYSQNWEPSYIRQRMLPMLSTI
YLREVASSPSTPLLLYDQYEFDSIQRIKIRHGHPYYLVKWKRGTQGMKSSISIKKPVTEG
EMSSEVVVLDEDEEEDAVVCESSELLDEPDVPQVLTDDGCCFLLTDEDIQLVSSAFPKET
ARFQEQQRLKEAKSRLRKSKSSTSSAFETPKGPRPSGVQLSITEFYRRSKKGLSIESGKK
PVGEGEASKEGSRKASDRDPNKDLPKSTRRRLHFD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggggggcagcttctgggacctcctgaagccctacgcgcggcacgagggcgcg
gggtacctccacggccgccgcgtcgccgtcgacctctccttctgggtcgtctcccacagc
accgccatccgggcgcgctcgccgggggcgaggaagccgcacctccggaacaccttcttc
cgcaccctctccctcttctcaaagatgggcgcattccccgtgttcgtagtggacggccag
ccgtcgccgctcaagtcgcaggccagggctgcgcgcttcttcaggggctccgggatggac
ctggccgcattaccgagcacagagacggagtccagcggggctgccacaccggtcaaaggg
aggaatgctgccttcacgcgatgcattgaggagtgcgtggaactgcttgaatatctcgga
atgcctgtattatgggcaaaaggtgaagctgaagccctttgcgctcagttgaataatgaa
ggtcatgtagatgcttgcatcactgcagacagtgatgcattcctctttggagctaagatt
gtcattaaggtcctcaaatcgaattgtaaggaaccttttgagtgctacaacatagcagac
attgaggctggccttggattgatgaggaaacaaatggtagccatggcacttcttattggt
agcgaccatgatttgcatggggtacctggtcttggtcttgagactgcacttcggtttgtg
cagttatttgatgaagatgaagttttggataagttacgtgaaattggtagagggttgtat
ccattcctagaaggattggacaatccacatattgatgatctcccatcatcatccacaaaa
ggctcaattgtgaaatcgctgcattgctcacattgtggtcacccgggcagtaagaaaaat
catagcaaggttgggtgcaattattgcttggtggatgccttagagaattgcgtggaaaaa
ccagctggtttcaaatgtgaatgccctagttgtgaaaaggcacgtgatctaaaggaacag
agaaaacatgaaaattggcaaatcaaggtctgcagaagaatagctgctgagacaaatttc
ccgaatgaggagatcattaaattgtatctaagcgatgacaatttggataaagaaaagggt
gttcctttgctaagttggaataaacctgatgttgaagctttggttgacttcttaacttat
agtcaaaattgggagccatcatatattcgacaaaggatgcttcctatgttgtcaaccata
tatttacgtgaggtggcatcatctccatctacaccattgcttctttatgatcaatatgaa
tttgattcaattcaacggataaaaataaggcatggtcacccttattacttggtgaaatgg
aagagaggtactcagggtatgaaatctagtatatctatcaagaagccagtaacagagggg
gagatgagtagcgaggtagtggtgttggatgaagatgaggaggaggatgcagttgtttgc
gagtcttctgagttattagatgaacctgatgttccacaagtgcttactgatgatggctgc
tgctttctattgactgatgaagatattcaacttgtcagttcagcatttcctaaagaaacg
gcaaggtttcaggaacaacagagactgaaagaagcaaaatcaagattgcggaaatccaaa
tcaagcacaagtagcgcgtttgaaacacctaaaggtccaaggcctagcggagtccagctt
agcatcacagagttctaccggcgctcaaagaaagggctgagcatcgaatccgggaagaag
cctgttggagaaggcgaagcatctaaggaaggctcaagaaaagcctcggacagggacccc
aacaaggacctgccgaagtctactcgacgccgcctccactttgactga
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