Panicum hallii (Hall's panicgrass): 112879713
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Entry
112879713 CDS
T07366
Name
(RefSeq) DNA mismatch repair protein MLH3-like isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112879713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112879713
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112879713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112879713
NCBI-ProteinID:
XP_025799871
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All DBs
Position
2:complement(49096089..49104443)
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AA seq
1222 aa
AA seq
DB search
MQTIKRLPKSVHSSLRSSIVLSDLPRVVEELIYNSIDANASKIDIAINIRACFVKVEDDG
CGITRDELVLLGEKYTTSKFHNVMEDGELSPRSFGLNGEALASLSDISVVEVRTKARGRP
NSYCKIIKGSKCLHLGIDDKREIVGTTVVVRELFYNQPVRRKQIQSSEKRELHHVKKCVL
QIALIHPQISIRLLDIDSEDELLYTAFSSSPLPLISKSFGDDVSRCLHEISASDQGWVLS
GHISGPADVFRTKDFQYLYINSRFVNRNPIHNMLNNLASSFQSSIMRTNEEIDVQSRKRQ
NTDIYPAFLLNFCCPRSSYDLHFEPTKTIVEFKDWQTVLLFFEQTVTNYWKTNALQSPKA
DRVCAGGTSVPLKNDVKLTKGLLRHHNVQNNEEYGHFKNTQQKNAVRDTNSDMSATGAPK
DSCCFSFDMEPSMQHVSFSGRITNSPWLTDNVASIDNKLRYKVMQSPERINYRWLEDGPS
QLDDDLSSVNPTGRKRQRTEGIFHEYAYTGNFGMLEDVPTEGFLAHKQESELIDSEVEIQ
EPCFGSFNRSDKMTSDLVQNQTNVKALTSGWDGSYVEFDKTNGDCLLNEATDTITDVSFP
EMLQFSDGFYHNDVNTSRSFRRVLRKCSINKKLGTAAGCVEGLEADTVSQMNFPDIHAVW
NSDLMDRPCIGDTFHHFSRLSSLADTPCSRARTGLILQKKSDKSFGSWNCENIDSDVRFA
LDRFSNVSSIICEGTKNLDYFDNAIQPLNYFNKDCGSTDQFGSEDDLIMWKSKFDTRFSV
DISPERSDNGCHLSVLSSNMANANTLTPDLLNQHNLGLDQRSRPSKGSRSRSHSAPPFYR
AKQKFFRLNELPSKLAIDGDKVICTNSPEDNASTPVDISRMSLTQPVPETDSSEFPDLSF
SSNGFVKFEDACSDGLEDSPAQITKWRDGSVQHTASNLPHGSFGGCYDDVLSISSGTLHL
SCSSLVPECVDKNCFEEARVLLQLDKKFIPVISGETILLVDQHAADERIRLEELRTKVLS
EEGHVVTYLDSEEELSLPETGFQLFQKYAEQIRKWGWIISSSSNSSESFKKNMNILRRQT
RLVTLVAVPCILGVNLTGKDLMEFIQQLDETDGSSAMPPAVLRILNFKACRGAIMFGDPL
LPSECCLIIEELKATSLCFQCAHGRPTTVPIVNVASLHSELVRHQMLSGRQAETWHGLAH
QGPSLERAQMRLKQLRKLRRGL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccataaagcgcttgccgaagagcgttcatagctccttgcgttcaagcattgtt
ctgtctgacctgccaagggttgttgaggaattgatatataatagcatcgatgcgaatgcg
agcaagattgacattgcaataaacatcagagcatgttttgtaaaagtggaagatgatggt
tgtggtattacacgagatgaattggttctcttgggcgaaaaatatacaacatccaaattt
cataatgtgatggaggatggggaacttagtcctagaagttttggactaaatggagaagca
cttgcatcactttctgatatctctgtggttgaagtcaggacgaaagctcgtgggagacca
aattcatattgcaagataataaagggatctaaatgcttacatctgggaatagatgacaag
agggaaattgttggcaccacagttgttgttcgggagcttttttacaatcaaccagtacgg
aggaaacaaatacaatctagtgagaaaagagaattacatcatgtgaagaagtgtgtcctg
caaattgcgcttattcatccacagatttcaatcagactccttgacattgacagcgaagat
gaattgctatacacagctttttcgtcatcccctttgcctcttatatcaaaaagtttcggg
gatgatgtctccagatgtctccatgagatatctgcctctgaccagggctgggttctttca
gggcacatatctggacctgcagatgtgtttcgtacgaaggattttcaatacttgtacatc
aactcaagattcgtgaatagaaacccgattcataatatgctcaataatctggcatctagt
tttcaatcttccattatgagaacgaatgaagaaattgatgttcagagcaggaagaggcag
aatactgatatataccctgcttttctactgaacttttgctgtcctagatctagctacgat
ctacattttgagcctacaaaaaccattgtggaattcaaggattggcaaactgtcttgctt
ttctttgaacaaactgtcacaaactactggaagacgaatgcactgcaatcaccaaaagct
gacagagtttgtgctggcggtaccagtgtgcctctgaaaaatgatgtgaaattgactaag
ggactcctaaggcatcataatgtgcagaacaatgaagagtatggtcacttcaaaaacact
cagcagaagaatgcagtcagagatacaaacagtgatatgagtgccacaggagcaccgaaa
gactcatgctgcttttcttttgatatggagccatccatgcagcatgtctccttttctgga
cggattactaattcaccctggctcactgacaatgttgccagtattgataacaagttaagg
tataaggtaatgcagtctcctgaaagaatcaattatcggtggttagaggatggtccttcc
cagttagatgacgatctttcaagtgttaacccaactggtcggaaaaggcaaaggacagaa
ggtatattccatgagtatgcatatactggtaattttggaatgttggaagacgtgccaact
gaaggttttttagctcacaaacaagaatctgagttgattgattcagaagttgaaatacaa
gaaccttgctttgggtccttcaataggtcagacaaaatgacctctgatttggtgcaaaat
caaacaaatgtaaaggcactcacatctggctgggatggatcatatgttgagtttgataaa
acaaatggggattgcctactcaatgaagctacagatacaattactgatgtttctttccct
gagatgttacagttcagtgatggattttatcataatgatgttaacacctccaggagcttc
cgtagagttttgagaaagtgcagcatcaataagaagttagggactgcagctggatgtgtt
gaaggccttgaagctgatactgtaagccagatgaacttccctgatattcatgctgtgtgg
aacagtgacttgatggataggccctgcattggggatactttccatcatttttcccgtcta
tcctcgttggctgatacaccttgcagtcgtgcaaggactggcttgatacttcaaaagaaa
tcagataaaagctttggttcttggaactgtgaaaatattgacagcgatgttagatttgct
ttggacagatttagcaatgtttcatcaataatatgtgaaggaactaaaaatttggattac
tttgataatgcaatacagccgcttaattacttcaataaggattgtggttcaaccgaccag
tttggttctgaagatgacctgataatgtggaaatcaaaatttgacacgagattttcagtt
gatatttctcctgagagaagtgataatggttgccatttgagtgtcctttcttccaatatg
gcaaatgccaacacacttactccagatctgctgaatcaacacaaccttggactggaccag
agatccaggccttccaagggcagtagatctaggagtcattctgctccaccattttataga
gcgaaacagaaattctttcgattaaatgagctaccgagcaaattggccatagatggcgat
aaagttatctgcactaacagccccgaagacaatgcatctacacctgtggatatctcacgt
atgagtttaacccagcctgttcccgagacagatagcagtgaatttccagacttaagtttc
agctcgaatggatttgtgaaatttgaagatgcctgttctgatgggcttgaagattcgcct
gctcagataactaaatggcgagatggctctgttcagcatacagcttcgaacttgccacat
ggttcttttggtggatgctatgatgatgtacttagcatttcttctgggaccttacatctc
tcttgtagctcgctagttcctgaatgtgttgacaagaactgctttgaggaggcaagggtc
ttgttgcagctggacaagaaatttattcctgtgatatctggggaaactatcctccttgtt
gatcagcatgcagctgatgaaaggatacgtttagaggagctacgtacaaaggttttatca
gaagaaggccatgttgtcacttacttggactctgaggaggaattatctctccctgagact
gggtttcaattgttccagaagtatgctgagcagattcggaaatggggctggatcatcagc
agtagtagcaattcttctgaatcattcaaaaagaacatgaacattctgaggagacaaacc
cgtcttgttactcttgttgctgttccatgtattttgggtgtcaatttgacagggaaagat
ctcatggagtttatccagcagcttgatgagactgatgggtcatcagctatgcccccagca
gttctccgtattcttaacttcaaagcttgcagaggggcgatcatgtttggtgaccccttg
ctaccatccgaatgctgtctgattattgaagagctgaaagcaacatctctatgcttccag
tgtgctcatgggcgcccgaccacggtgcctatagtgaacgtcgcatccctccacagcgag
ctggtgaggcaccaaatgctgagcggcaggcaggcggagacctggcacggcttggcgcac
caagggcccagccttgagcgtgctcagatgcgcctcaaacaactgagaaagctgcgccgt
ggcctgtag
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