Panicum hallii (Hall's panicgrass): 112879929
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Entry
112879929 CDS
T07366
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112879929
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112879929
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112879929
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112879929
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112879929
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112879929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
112879929
NCBI-ProteinID:
XP_025800155
LinkDB
All DBs
Position
2:complement(46892772..46898342)
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AA seq
1057 aa
AA seq
DB search
MGKKVKPKPKNLRKAQERGPSASSSDVGPGDAASQDASHSAEETTASASGREHCGHYSRD
SAHLDKVLLEILSSKHVASCEHCREDAPRKKGGAGSKEKGGKKKKGGASKGAAAKAQAKA
EKSDVWVCLDCGRHFCGGAVEDAKPYGHARRHAKQDRHWWAARYDDPTVAYCLSCEKEVS
IEMPKIETVVAEVVDDKVVGIEDPDASGLVNPHANVIKGLPNLGNTCFFNAVLQNLLALD
RLRRKILGPDVPTGALAMSLKKLFGETSASNHAGGALSPKNLFSSICSKYPQFRGYQMQD
SHELLRCFLDGLRTEETEARKLVEEASDAGVPTIVDSIFGGQLSSTVSSTECSHSSVKHD
QFLDLSLPVPSRRPPTKSVSSPRAKKTKQSIRDRNKSRRYGKIPARASPSVESNKEQIQT
IDARNNSQIPGSEKQVVSEKEPEPSICSESCASVSNQEQKATSNVVDSICWLDYVADADE
TKSEILDSADSTETGHIWESRDAAHGPLHPQDDAVPKEQILGSEHSGENTVDDAPLLQPV
ILLPYKEFGTTVKERDETIENSQNSECAVPPPDVSPVTENNTQPAYGGDVEQDDYGFGDM
FNEPEVTSEVKKENGKAEDIDVMAWSSNSADDEVDDSNAPVSVEGCLALYTEPELLSEPW
LCEHCTNAARLSADEAKNVVEMTDGAEIKDGEEMMAGGDGRQDGEKLIMSCSKEDIDQVM
TTDGCKKDIDQIMATDDCSDNLHSGIHCKEGGCADPSLADPEHCNGNCPDTENATIQRTG
AVFTVEKTGPSNSQTDHKEQSVDLRSLELESSSLNKQQHDVNIQYNDGHNVDITAESTSA
PVSCDRDSVSCSATNNVEAEHVGGAEEVVSSSLPSDAQKTLQSAKDNEDVITRNQGRRKR
MKMVGKAQQMQDSQNKNKEDETKVFRAAMRRILISKAPPVLTINLNRFSQDSHGRYKKLK
GHVRFKEMLDIQPFMDPRCKENNNTTYRLVGVVEHLGTMTGGHYIAYVRAAKIGGRQQQS
SSSKSWFYASDGQVREASLEEVLNCEAYILFYERVAD
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaggtgaagcctaagcccaagaacctgcgtaaagcgcaggaacggggtcct
tcagcctcatcctcagatgttggacctggtgatgcggcatcgcaggacgcaagccactca
gcagaagaaacaactgcatcagccagtggcagggagcattgcggccactacagccgtgac
agtgctcacttggacaaggttctcctggagatcttgtcttccaagcacgttgcatcgtgc
gagcattgccgggaggatgccccgagaaagaaaggtggtgctggaagcaaggagaaaggt
gggaagaagaagaaaggaggcgcctccaaaggcgctgctgccaaggcacaggcaaaggcc
gagaaaagcgatgtgtgggtctgcttggactgtggtcggcatttttgtggtggtgcagta
gaggatgccaagccctatggacatgccaggcggcatgctaagcaggatcggcattggtgg
gctgcaaggtatgatgacccaacagttgcttattgtttgtcctgtgaaaaggaggtgtca
attgagatgcccaaaatagagacagttgtggcagaagtagtggatgataaggtggttggt
attgaggatcctgatgcatcaggtttggttaacccccatgctaatgtgatcaaagggctg
ccaaatcttggaaacacatgcttcttcaatgcagtgctgcagaacctcctcgcgcttgat
aggttgcgcaggaagatattagggccagatgttcctacaggggcacttgctatgtcactg
aagaagctttttggagagacaagtgcttcaaaccatgcaggaggggcgcttagcccgaaa
aacctcttctcaagcatttgctcaaaatatccacagttcagaggctaccagatgcaggat
agccatgaactactccgttgttttcttgacggtttacgtacagaggaaactgaagcacga
aagctagtggaagaagcttcagatgcaggggtccccacaattgttgactccatctttggg
ggtcagctgtctagtactgtgtccagcacagaatgctcacacagctccgttaaacacgat
caattccttgatctctcgctcccagttccatcacggaggcctcctaccaagagtgtttca
tccccacgcgcaaagaagaccaaacagtccatacgagataggaacaaaagtcgtagatat
gggaagattcctgctcgagcatctccttcagtggagagtaacaaagaacagattcaaaca
attgatgcgcgcaacaattcccaaattcctggttcagaaaaacaggtagtcagcgagaaa
gagccagagccctctatctgcagtgagtcatgtgcttctgtgtctaatcaagaacaaaag
gccacttcgaatgtggtggatagcatatgctggttggattacgttgctgatgctgatgaa
acaaaatctgagattcttgattctgcagattctactgaaacaggacatatttgggaaagt
agggatgctgcacatggtcctttacaccctcaggatgatgccgtacctaaagagcagatc
ttgggttctgagcactcaggtgagaacactgttgatgatgctccccttttgcagcctgtt
atcttacttccttataaagaatttggtaccactgtcaaggaaagggatgaaaccatagaa
aattcgcagaattcagaatgtgcagttcctcctccagatgtttctccagtaacggaaaat
aatacacaacctgcatatggtggagacgtagagcaagatgactatggttttggtgatatg
ttcaatgagccagaagttacttctgaagtcaagaaagaaaatggtaaagctgaagatatt
gatgtgatggcttggagtagtaatagtgctgatgatgaggtagatgatagtaatgctcct
gtatcagttgagggctgcttggctttgtatactgaaccagagctgctatctgaaccatgg
ttgtgtgagcactgtactaatgctgcacgcctaagcgctgatgaagcaaaaaatgtcgtg
gagatgacggacggtgctgaaataaaggatggtgaggagatgatggcaggtggtgatgga
agacaagatggtgagaagttgatcatgagctgcagcaaagaggacattgatcaggttatg
actactgatggttgcaaaaaggacattgatcagattatggcaactgatgattgttctgac
aatttacattctggtatacactgcaaggaaggtggatgtgcggatccttctttggctgac
cctgaacactgcaatggtaattgtccagacacagaaaatgctactatacagagaactggt
gcagtgttcacagttgagaagactggaccgtcaaacagtcagactgaccataaggaacag
agtgtggatttgagaagcttagaactggagtcctcatctttgaataagcaacaacatgat
gtgaatatccagtataatgatggacataatgtggatataaccgctgagtctacaagtgca
ccagtgagttgtgatagggattctgtctcttgcagtgcaactaacaatgtagaagctgaa
catgttggcggtgctgaagaagttgtgtctagtagccttccatcggatgcacaaaaaacc
ttgcagagtgcaaaagataatgaagatgtcatcacaaggaatcaaggcaggaggaagcga
atgaagatggttggtaaggcacagcaaatgcaagatagccaaaataagaacaaagaggat
gagacaaaggttttcagagctgcaatgagaagaattcttataagcaaggctccacctgta
ttgacgattaacttgaacagattcagccaggattcccatggtcgatataagaaattgaaa
gggcacgtgcgctttaaggagatgcttgatatacaaccattcatggacccaagatgtaag
gagaacaacaacaccacttatcgtcttgttggcgttgtcgagcacttgggaaccatgaca
ggaggtcattatattgcgtacgttagagctgccaagattggaggtcggcagcagcagagc
agtagctcgaagtcttggttttacgcaagcgatggacaagtgagagaagcctctctggag
gaagttctgaactgtgaggcttacattctgttttatgagagggtggccgactag
DBGET
integrated database retrieval system
