Panicum hallii (Hall's panicgrass): 112879969
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Entry
112879969 CDS
T07366
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112879969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112879969
Spliceosome [BR:
phai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112879969
Complex C
U4/U6.U5 tri-SnRNP related factors
112879969
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
112879969
NCBI-ProteinID:
XP_025800198
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Position
2:complement(14676964..14680572)
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AA seq
389 aa
AA seq
DB search
MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTGTVADVYQYL
EPLYNDYRKIRHKLSDGQFTLTHVDEFIDELLTKDYSCDTALPRIQKRWVLEASGTLEPR
RSALEDDFEEEEEDKEEEQPMEIDEPNGCEKDNHRGRSPARERDRDRDRKHERHHRDRDY
DRDRGYDRDYGRGRERDRDRDRERDRNRDRDRDRHRLRDDDYSRDRDRDRERDGRERERR
DRDRGRHRSRSRSRDRRDRDREDGEYRRRRGRGSVSPRGRGEDGITREEPKRKKEKKEKK
GEGNAPDPNDPEIIEMNKLRASLGLKPLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggaccccctcgcgaagagcatccacgggacgaacccgcagaacctg
gtggagaagattgtgcgctccaagatctaccagagcacctactggaaggagcagtgcttc
ggcctcaccgccgagacgctggtcgacaaggccatggagctcgaccacaccggcggaacc
tacggcggcaaccgcaagcccaccccgttcctctgcctcgcgctcaagatgctgcagatc
cagcccgacaaagacatcgtcgtcgagttcatcaagaacgaggactataagtatgttcgc
gttcttggggccttctacctgcgcctcaccggcaccgtcgccgatgtctaccagtatctg
gagccgctttacaatgactaccgcaagatcaggcacaagcttagcgatggacagttcaca
cttacccatgttgatgagttcatcgatgagttgctgaccaaggactactcctgtgataca
gccctgccccgcatccagaaaagatgggttcttgaagcgtctggaactctagaaccaaga
agaagtgcacttgaggatgattttgaggaagaagaggaagacaaggaggaagaacaacct
atggaaattgacgagcctaacggctgtgaaaaggataatcatcgtggaaggagccctgca
agggaacgggatagggaccgggacaggaaacatgaaaggcaccacagggaccgagactat
gatagagatcggggttatgatagggactatgggagaggacgggaaagagaccgagataga
gatcgtgaaagggacagaaacagggatagggatcgtgatcgtcaccgcctgcgagatgat
gattacagccgagacagggaccgagaccgtgagagggatggtagggaaagggaacgccga
gacagagaccgtggcaggcataggagccgctcaaggagcagggatcgacgagacagagac
cgtgaagatggagagtaccgcaggaggcgtggtcgtggtagtgtgagtcctcgagggcgt
ggtgaggatggcatcacaagagaggaaccaaagaggaagaaggaaaagaaagagaagaag
ggtgaagggaatgctccggatccgaatgatcctgagatcatagaaatgaacaagctccgg
gcctctctagggttgaaaccactgaagtag
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