KEGG   Panicum hallii (Hall's panicgrass): 112879969
Entry
112879969         CDS       T07366                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112879969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112879969
Spliceosome [BR:phai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    112879969
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    112879969
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 112879969
NCBI-ProteinID: XP_025800198
LinkDB
Position
2:complement(14676964..14680572)
AA seq 389 aa
MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTGTVADVYQYL
EPLYNDYRKIRHKLSDGQFTLTHVDEFIDELLTKDYSCDTALPRIQKRWVLEASGTLEPR
RSALEDDFEEEEEDKEEEQPMEIDEPNGCEKDNHRGRSPARERDRDRDRKHERHHRDRDY
DRDRGYDRDYGRGRERDRDRDRERDRNRDRDRDRHRLRDDDYSRDRDRDRERDGRERERR
DRDRGRHRSRSRSRDRRDRDREDGEYRRRRGRGSVSPRGRGEDGITREEPKRKKEKKEKK
GEGNAPDPNDPEIIEMNKLRASLGLKPLK
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcgaaccgcacggaccccctcgcgaagagcatccacgggacgaacccgcagaacctg
gtggagaagattgtgcgctccaagatctaccagagcacctactggaaggagcagtgcttc
ggcctcaccgccgagacgctggtcgacaaggccatggagctcgaccacaccggcggaacc
tacggcggcaaccgcaagcccaccccgttcctctgcctcgcgctcaagatgctgcagatc
cagcccgacaaagacatcgtcgtcgagttcatcaagaacgaggactataagtatgttcgc
gttcttggggccttctacctgcgcctcaccggcaccgtcgccgatgtctaccagtatctg
gagccgctttacaatgactaccgcaagatcaggcacaagcttagcgatggacagttcaca
cttacccatgttgatgagttcatcgatgagttgctgaccaaggactactcctgtgataca
gccctgccccgcatccagaaaagatgggttcttgaagcgtctggaactctagaaccaaga
agaagtgcacttgaggatgattttgaggaagaagaggaagacaaggaggaagaacaacct
atggaaattgacgagcctaacggctgtgaaaaggataatcatcgtggaaggagccctgca
agggaacgggatagggaccgggacaggaaacatgaaaggcaccacagggaccgagactat
gatagagatcggggttatgatagggactatgggagaggacgggaaagagaccgagataga
gatcgtgaaagggacagaaacagggatagggatcgtgatcgtcaccgcctgcgagatgat
gattacagccgagacagggaccgagaccgtgagagggatggtagggaaagggaacgccga
gacagagaccgtggcaggcataggagccgctcaaggagcagggatcgacgagacagagac
cgtgaagatggagagtaccgcaggaggcgtggtcgtggtagtgtgagtcctcgagggcgt
ggtgaggatggcatcacaagagaggaaccaaagaggaagaaggaaaagaaagagaagaag
ggtgaagggaatgctccggatccgaatgatcctgagatcatagaaatgaacaagctccgg
gcctctctagggttgaaaccactgaagtag

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