Panicum hallii (Hall's panicgrass): 112880065
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Entry
112880065 CDS
T07366
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112880065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112880065
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112880065
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112880065
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112880065
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112880065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
RA_2
Ubiquitin_2
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
112880065
NCBI-ProteinID:
XP_025800316
LinkDB
All DBs
Position
2:complement(2385058..2397580)
Genome browser
AA seq
1118 aa
AA seq
DB search
MTTSPPPPPPAEQQQQEEEEVLVPHQELPNGTQPMEVVPAEPAATVENQQIEDPPISRFT
WTIENLSRVSTKKLYSEVFVVGGYKWRILIFPRGNNVEFLSMYLDVADSGVLPYGWTRYA
QFSLSVVNQIHNKFTIRKETQHQFSARESDWGFTSFMPLGELYNPSRGYLVNDTCIVEAE
VAVCKVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDKMK
GTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQDVYASFDKYVEVER
LEGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD
LDRDNGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTK
EDAKKALEEQYGGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDI
AEHLRIRLEKDREEKERRKKEKAEAHLYTIIKVARDDDLKAQIGKDIYFDLVDHDKVPSF
RIQKQMTFTQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLSPQDEAHTVGQLKEL
VNKAHNAELKLFLEVELGLDLKPLPLPEKTREDIFLFFKLYDPEKEELRYVGRLFVKASG
RPQDILPKLRMLAGFSQDDDIELYEEIKFEPNVMCEYIDNRLLFRSCQLEDGDIICFQKS
PKPDSADRYRFPDVPSFLVYIRNRQVVHFRSLEKPKEDDFCLEMSKIFTYDEVVEKVAQK
LGVDDPSKIRLTSHNCYSQQPKPQPIKYRGVERLLDMLIHYNQTSDILYYEVLDIPLPEL
QALKTLKVTYHHATKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPNAELRLLEVFYHK
IYKVFAPNEKIENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNFGE
PFFMVIREDETLSSIKERIQKKLKVPDEDFSKWKFAYISLGRPDYFEDSDIVATKFQRNM
YGAWEQYLGLEHPDTAPRKAHTVNQNRHSFERPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctcgccgccgcccccgccgccagctgagcagcaacaacaggaggaagaggag
gtgctcgtgccgcaccaggagctgcccaacggaacgcagccaatggaagttgtgcctgct
gagccagctgctactgtggaaaaccaacagatagaggatccaccaatctcgagatttact
tggaccattgagaatctatcaagagttagcacaaagaagctctactccgaagtttttgtt
gtcggaggctacaagtggcgaattttgattttcccacgaggaaataatgttgaattcttg
tctatgtatttggatgtggccgattctggagtcttgccctatggatggactagatatgca
cagttcagcctctctgtggttaatcaaatccacaacaagtttacaataagaaaagaaaca
caacatcagttctctgctcgagaaagtgattggggtttcacttcatttatgccgttgggt
gaactctacaaccccagtagaggttatcttgtaaatgatacttgtatagtggaagctgag
gttgctgtgtgtaaagttgttgattattggagttatgactctaaaaaggaaactggttat
gttggtctcaaaaatcaaggtgctacttgctacatgaattctcttctacagacgctgtac
cacatcccgtatttcagaaaggctgtttatcacatgcccacaactgaaaatgatatgccc
tcgggaagcattccgttagctctgcagtcactgttctataagttgcagtataacgacagc
agtgtctctacgaaggagctcacaaaatcattcgggtgggacatgcatgattcatttatg
cagcatgatgttcaagagttaaatagagttctttctgagaagttggaagataagatgaag
ggaactgttgtggagggcacaatacaacaattgtttgaagggcaccacatgaattacatc
gagtgtatcaatgtggatttcaaatcaacaagaaaagaatccttctatgatctccagctt
gatgtcaaaggttgtcaggatgtctatgcttcatttgataagtacgttgaggtggagcgt
ctggaaggtgacaacaagtatcatgccgaacagcatggccttcaggatgcaaagaaagga
gttcttttcattgacttccctcctgttttgcaacttcagctaaaacgttttgaatatgat
ttcatgcgtgatacaatggtgaagattaacgatcggtatgagttcccacttcagttggat
cttgatagagataatggaaaatatttatcacctgatgctgacaggaatgtgcggaatctt
tacacccttcacagtgttcttgtccatagcggtggtgttcatggtggacattattatgct
ttcatacgacctactctttctgatcaatggttcaagtttgatgatgagcgtgtaacaaag
gaagatgcaaagaaggcactggaagagcaatatggcggtgaggaggagctacctcagaca
aatcctggcttaaacaacactcctttcaagtttaccaaatattcaaatgcatatatgctt
gtgtacattcgtgaaagtgacaaggacaaaattatatgtaatgtggatgagaaagacata
gcggagcatcttcgtattagattggaaaaagaccgtgaagagaaggagcgcaggaaaaaa
gagaaagctgaggcacacctctataccatcatcaaggttgcgagggatgatgacttaaaa
gctcagatagggaaagacatatattttgatcttgttgatcatgataaagttccaagcttc
cgtatccaaaagcagatgacctttactcaattcaaggaggaggtagcgaaggagtttggt
attccaacacagtttcaacgattttggctgtgggccaagcggcaaaaccatacttaccgg
cccaaccgaccattgtctcctcaagacgaagcgcacactgttgggcagttaaaggaactg
gtgaacaaggcccacaacgctgaactgaaattgttcttggaagttgaacttggactggac
cttaagccccttcctcttccagagaagacaagagaagatatatttcttttcttcaaactc
tatgaccctgaaaaggaagagctgcggtatgttggtaggctctttgtaaaggcttcagga
agaccacaggacattctgccaaagttaaggatgttagcgggtttttcacaagacgatgat
attgaactttatgaggaaattaagtttgagcccaatgtgatgtgtgaatacattgataac
aggcttctgtttcgatcttgccagcttgaagatggggacataatttgttttcaaaaatct
ccaaagccagatagtgctgaccgatatagattccctgatgtcccgtcctttttggtgtat
atacgtaaccgacaggtggtccacttccgttcactggagaagcccaaggaggatgatttt
tgtctagagatgtcaaagattttcacgtatgatgaagttgtggaaaaagtggctcaaaaa
cttggagtggatgacccatcgaaaattcgacttacatcacataattgttattcgcaacaa
cctaagcctcaaccaataaagtacagaggcgttgaacgtctactggacatgttgattcac
tataaccagacttctgatattttgtactatgaggtattggacataccacttccagaatta
caagcgctgaagacattaaaagttacttatcatcatgccacaaaagatgaggtgtcagtt
cacagtataagattgccaaagaacagcactgttggcgatgtgctaaacgatatcaaatcg
aaggttgagttgtctcatcccaatgctgagctaagattacttgaggtcttttatcacaag
atatacaaggtttttgcaccaaatgaaaagatagaaaacattaatgatcagtactggaca
ttgcgtgcagaggaggttccagaggaggagaaaaaccttggtccctttgaccgcttgatt
catgtatatcattttacaaaagatactcaaaaccaaacgcaagttcagaacttcggagag
ccattttttatggttattcgtgaggacgaaaccctatcttctatcaaggaacgtatacag
aaaaagcttaaggttccagatgaggatttctcaaagtggaaatttgcatacatttcactt
ggccgtccagactattttgaagattcagatattgtagctacaaaatttcagagaaacatg
tatggagcttgggagcagtatcttggactggaacatccagacacagctcctaggaaggca
cacacggttaatcagaaccggcattcatttgagagacctgtaaaaatttataactag
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