KEGG   Panicum hallii (Hall's panicgrass): 112880101
Entry
112880101         CDS       T07366                                 
Name
(RefSeq) protein transport protein SEC31 homolog B isoform X1
  KO
K14005  protein transport protein SEC31
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112880101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112880101
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phai02044]
    112880101
Membrane trafficking [BR:phai04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    112880101
Secretion system [BR:phai02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   112880101
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd TPR_Sec16 Beta-prop_EIPR1 WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 TPR_GEMI5 Beta-prop_IFT140_1st SRA1 EIF3I ANAPC4_WD40 Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_WDR19_1st Prp18 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 112880101
NCBI-ProteinID: XP_025800367
LinkDB
Position
2:55949144..55960077
AA seq 1126 aa
MACIKSAQRAALTALAPDAPYLAAGTMSGAVDMSFSASANIEIFRLDFQSDSPDLPLLAS
APSPDRFNRLSWSRPGAVEGDSFALGLLAGGLSDGSVAVWNPLSMISSEGKAEDAMVARL
EKHTGPVCGLEFSELTPNRLASGAEQGELCIWDLKNPVEPVVYPPLKQSVGSSAQAEISC
LSWNPKFQHILATTSSNGMTVVWDLRNQKPLTSFSDSIRRKSSVLQWNPDMSTQLIVASD
DDTSPSLRVWDVRKTISPVREFVGHSKGVIAMSWCPYDSSFLLTCSKDNRTICWDTVSGE
IISELPTSDNWNFDLHWYRKIPGVIAASSFDGKIGIYNLEFSGLYAASDAGAPARPRAPA
PKWLKCPTGASFGFGGKLVAFHPAAPTQGAQVSSSEVHVHNLVIEQSLVSRSTEFEAAIQ
NGDKSSLRALCEKKSQESLSDEERETWGFLRVMFEDGDVARTKLLAHLGFEPPQAPTVDS
TDELSQTLADTLNLDHGTTTDNADAQFLADNGDDFFNNPQPSEASLAEESISTNAEQIEQ
EMPGDVVPSDPSIDKSIQHALVVGDYKGAVKQCLAANRMADALVIAHAGGSALWESTRNQ
YLRKSISPYLKVVSAMVGNDLMSFVSTWPLSSWKETLALLCTFARKEEWNVLCDTLASRL
LSVGNTLAATLCYICAGNIDKAVEIWSRNLKSEDGGKTYVDLLQDLMEKTITLALATGHK
RFSASLSKLVENYAELLASQGLLKTAMEYLKLLGSDEHSHELAILRDRIAFSTEENDAAR
SSVSDSTGASSPYATNQSYITPDHSQNLYQQVQSYNVPSNTYSDGYQQQPNAAFAYNNAY
QPTQPAQMFVPPSAPISSQQPQGSAPVPVPPQTVKTFTPANPMSLKNAEQYHQPNTLGSQ
LYTGAANQPYSTASSAPYQSGPPPTFKPVQYQTTPVPSVGPTASVPGTVPNQMLPHSAAA
TNSTSRFMPSNNQGFVQRPGLSPAQPSSPTQAQAPAQPAPPAPPPTVQTADTSKVSAELR
PVIATLTRLFDETSKALGGSQATQAKKREIEDNSRKIGALFAKLNSGDISPNVSSKLIQL
CSALDSSDFATAMHLQVILTTSDWDECNFWLAALKRMIKTRQNFRM
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggcgtgcatcaagagcgcacagcgggcggcgctgacggcgctggcgccggacgcgccg
tacctcgccgccggcaccatgagcggagccgtcgacatgagcttctccgcgtccgccaac
atcgagatcttccgcctcgacttccagtccgactccccggacctcccgctcctcgcctcc
gcgccctcccccgaccgcttcaaccgcctctcctggtcgcggccgggcgccgtggagggc
gactccttcgcgctgggcctccttgcgggaggcctcagcgacggctccgtcgccgtgtgg
aacccgctgagcatgatcagctccgagggcaaagcggaggacgccatggtcgcgcggctc
gagaagcacaccggaccggtttgtgggttggagtttagcgagctcacgccgaatcggctc
gcttcaggggctgagcagggggagctctgcatctgggatctcaagaacccagtggagcca
gttgtttacccgccactcaagcagagtgtgggttccagtgcccaagctgaaatctcttgt
ttatcatggaatcccaagtttcaacatatattagcaaccacttctagtaatggaatgaca
gttgtttgggatttaaggaaccagaaaccactgactagcttttcagattctattagaagg
aaatcctctgttcttcaatggaacccagacatgtccacccaactgattgttgcatcagat
gacgacacctcaccatctctgagagtttgggatgtgaggaagaccatttcaccagtaaga
gaattcgttggccattcaaaaggtgtaattgctatgtcctggtgcccttatgatagttcg
ttcttgctcacatgttccaaagacaatagaacaatttgttgggatactgttagtggagag
attattagtgagctaccaaccagcgataattggaattttgaccttcactggtatcggaaa
attccaggcgtcatagcagcgtcctcatttgatgggaaaattggcatatacaacctagag
ttctctggactttatgcagctagtgatgcaggtgccccagctcgtccaagagcgccagct
ccaaaatggttgaaatgccccactggtgcatcttttggctttggtggtaaacttgttgct
ttccatccggcggcacccacccaaggcgcccaagtatcttcttctgaggtgcatgtgcac
aatttggtgattgagcaaagtctggtcagccggtcaactgaatttgaagctgctatacag
aatggtgacaagagttcgctgcgtgctctgtgtgaaaaaaagtcacaagaatcattatct
gatgaggaaagagaaacatggggcttcttaagggttatgtttgaggatggggatgttgca
aggacaaaattgcttgctcatcttggcttcgaaccgcctcaagcaccaactgtggattca
actgatgaactgagccaaacattggcggatacacttaatcttgatcatggcacaacaact
gataatgcagatgctcaatttctcgctgataacggggatgattttttcaataatcctcaa
ccttcagaggctagcttagctgaagaatcaatttctacaaatgctgaacagatagagcag
gaaatgcctggagatgttgtgccatctgatccatcaattgacaagagcattcaacacgcg
ttggtggttggagactacaaaggggcagttaaacagtgccttgctgcaaatcgtatggct
gatgctttggttattgcccatgctggtggttcggctctatgggaaagcacaagaaatcag
tatcttagaaagagtatctcaccctacttaaaggttgtttctgctatggtgggcaacgat
ttaatgagtttcgtgagtacttggcccctaagttcgtggaaagagactcttgcgctattg
tgcacatttgcgcggaaagaggaatggaatgttttgtgtgacacacttgcatctagactc
ctgagtgttggaaatacactagctgcaactctttgttacatctgtgctggaaatattgac
aaagctgtggaaatatggtctcgcaacttgaagtctgaagatggtgggaagacttatgtt
gatcttctccaggatttgatggaaaagaccattactctcgcccttgctacaggccacaag
agatttagcgcatcgctctctaagcttgttgagaactacgctgaactgttggccagtcaa
ggtcttctgaagactgcaatggagtatttgaaactgttgggatcagatgaacattcacat
gagctggcgattttgagagatagaattgcattttctacagaagagaatgatgctgctagg
agctctgtttctgatagcactggtgccagttctccgtatgccactaatcagagttatatc
accccggaccattctcagaatctttaccagcaggtacaatcatataatgttccaagtaac
acatattcggatggttaccagcaacaacctaatgcagcctttgcatacaacaatgcatac
caacctacacaaccagcccaaatgtttgttccaccaagtgcgcccatcagctctcagcaa
ccacaaggttctgctcccgtgcctgtgccaccgcaaacagtaaagacatttactcctgca
aacccaatgagtctcaaaaatgcagaacaatatcatcaacctaataccttgggctcacag
ctttacacgggtgctgcaaaccagccatattctactgcatcatctgctccgtatcaaagc
ggacctccacccacattcaaacctgttcaataccagactacaccagtcccttccgttggt
cctactgcctctgtaccaggaacggtccctaaccagatgcttccccattctgctgctgca
actaactcaacatccaggtttatgccatcaaacaatcaaggctttgttcagagaccaggc
ttgagtcctgcccagccctcaagcccaacacaggcacaggcaccggcacagccagctcct
cctgcacctcccccgactgtgcagacagctgatacatcaaaggtttctgctgagctgaga
cctgttattgcaacactgaccagactatttgacgagacatccaaagccctcgggggatca
caagctactcaagcaaagaagcgtgaaattgaagataattcaaggaaaataggggcattg
tttgcgaaactaaatagtggcgacatatctccaaatgtttcatctaaactcattcagctg
tgcagtgcacttgatagtagtgattttgccactgcgatgcacctccaggtaatcttgaca
acaagtgactgggatgagtgcaacttttggcttgcggcattgaagcgtatgatcaagaca
cgacagaacttcagaatgtaa

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