Panicum hallii (Hall's panicgrass): 112880116
Help
Entry
112880116 CDS
T07366
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112880116
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112880116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
RemA-like
Motif
Other DBs
NCBI-GeneID:
112880116
NCBI-ProteinID:
XP_025800390
LinkDB
All DBs
Position
1:1547470..1551957
Genome browser
AA seq
514 aa
AA seq
DB search
MALPPEEEAAIDGIPEGGVEEEEEEEEDPQEVEPWFPSSDSEPEPDADRPALEPLDPFPA
AAETELQPARMAVQEEKGDGEEARPRWPGWPGASVFRLLVPAEKVGGLIGRRGSTIKRLC
DETRARVRVIDAAHAAADRIVLVSATEEVEAELPPAMNAAIKIFKHINRIEEINSDGTLS
ASAPDICSVRLLVPAAQAVHLIGTQGVTIKSIQESIGAMIRIIDEDELLNFEALDESIVE
IYGVSVKVHSALKSVLGLLRKFLVDHGVLHLFERKNQEVAQPQDTSKENQFIDAYHLEVN
QDFWLYDQRGYGTPISSRPFWGHDPSFCDPYSSDIIHATDSLMAQPGHAKPKGSRFLYGC
DPSFHNQYSPDLSQPTDQLITQTMKIPLPHAEEIIGARGENIEFIRSASGAVVILEEIGD
YPEEVLVMIKGSPSQVQTAYQVLQEVLSGNREPPPPPRICYRDARRSWATAAELLPSCWR
AAAELPAHWAEVAALPPTTRRCNKPGLAAMAPRR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccgccggaggaggaggctgcgatcgatggcattccggaaggtggcgttgag
gaggaggaggaggaggaggaggatccgcaggaggtggagccgtggttcccatcctccgac
tcggagccggagccggacgcggaccgcccggcgctcgagccgctggaccctttccccgcc
gcggccgagacggagctacagccggcgcggatggcggtgcaggaggagaagggagatggg
gaggaggcgaggccgcggtggcccgggtggcccggcgcgagcgtgttccggctgctggtg
cccgcggaaaaggtcggcggcctcatcgggcgccgcggtagcaccatcaagcgcctctgc
gacgagacccgcgcccgcgttcgcgtcatcgacgccgcgcacgccgccgccgaccggatt
gttttggtatctgcaacggaagaagttgaagcagagttaccacctgcgatgaatgctgca
attaagatcttcaagcatataaacaggatagaagagatcaattctgatggaactttatct
gcttctgcaccagacatttgttccgttagattattggttccagctgcacaagctgtccac
ttaattggcacgcaaggagttacaattaagtcaatccaagaaagtattggtgctatgata
aggattatagatgaagatgagctattgaattttgaggcactggatgaaagcattgtggag
atatatggggtttctgtcaaggttcacagtgccctaaaatcagtgctcggacttctccgg
aagttcctagttgatcatggtgtgcttcatctatttgaaaggaagaaccaagaagtagct
cagccacaggacacttctaaagaaaatcaatttattgatgcttatcatcttgaagtgaac
caggatttttggttatatgatcagcgaggttatggtaccccaataagcagtagaccgttc
tggggtcatgatccatctttctgtgatccttactcatcagatatcatccatgcaactgat
tccttgatggcacagccgggtcatgctaaaccaaaaggcagtagattcttatatggatgc
gatccatcttttcataaccagtactctccagatctcagccaaccaactgatcagttaata
acacagacaatgaagatcccgctgccacatgctgaagagataattggcgcgaggggagaa
aacattgaatttatccgttctgctagtggagcagttgtgattcttgaggaaattggagat
tatcccgaagaggttctagttatgatcaaaggcagtccttcgcaagttcaaactgcatat
caagttttacaggaggttctttcaggcaacagggagccgccgccgccacccaggatctgt
taccgcgacgcacgccgaagctgggccacggctgccgagctcctcccctcatgctggcgc
gctgctgctgaactccccgcacactgggccgaggtggctgcactcccccctaccacacgg
cgttgcaacaagccgggactagctgccatggcaccacgaagatga
DBGET
integrated database retrieval system
