KEGG   Panicum hallii (Hall's panicgrass): 112880508
Entry
112880508         CDS       T07366                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phai03036]
    112880508
   03400 DNA repair and recombination proteins [BR:phai03400]
    112880508
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    112880508
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112880508
SSDB
Motif
Pfam: MMS19_N MMS19_C Cyt_b-c1_8
Other DBs
NCBI-GeneID: 112880508
NCBI-ProteinID: XP_025800937
LinkDB
Position
2:3134879..3145073
AA seq 1144 aa
MARVPLGEWVPHVEAYVDVSRPAAQHSASVDALAALVNKDRLALFDLVSKMEMYLTTTDH
IVRSRGILLLGEILSRISVKWLDVNTITTLSDFFISRLSDWQAIRGALVGCLALLHRKQG
VGCIVFADVKRLVESFLQNVQVQSLAAADRKLCFQILSCILDRYPEAIKTMDGEQLYWIC
EAIDEEKDPECLKLSFHVVEVVMKLFPDPSGLAAQFASEFFEILSKYFPVYFTHGAGDDL
NATRDDLSRALMNAFCSTPYFEPFAIPLLLDKLSSSLPLAKLESLKYLDNCIRFYGADRM
VRHASAVWLKLKEVIFSLSPEQLLLTSGSAKDAEKNKNQMVSETLNCLKTAITYIDSSDK
DLFINLILLDEDIVNKIHSISSAEKSILSSLEDLAQVNALGSVISILAESSTYFCTRVFQ
EHLTHLVDILGTSTDYESRQLNTCNGSSSAAVNYGALYLCVQMLASCREVALVSYAECSS
LKLAKESWWLILEKKLDQLIHLLGLFLTLDSRSMQSMFRQEYDACAVKGLLTLATFPEQC
SPLQANAFEDILAMLTSVITSKFENVDLWRLSLKALTSIGSSIIEFNASQKEVIYCRTVV
DKIVSLLESYDGSMPLSLRLEASYEVGTAGLNHMLRVARSLEGAVVTNISKANGRMECAE
YVAHLFECYSSRVLPWLFTSGGINELALSFAMHLLDEIKDLSMLDRISSQGLLDSLMTGM
KLLVGVCTEEQQTLIVQKAYSMVSSVLPLPLKSMTRCLLAVDELVPSHSVQETALIGMLS
SVIVGLRLQTPVPDMIVMINLFTVFLLNGQLPAAYALASIFNKYLHNPEFSHENQLDKIF
DDILERCFSTVLANSYSKISHSSVDTSNDANFLYVSSGNIASKIDILSGLAWIGKGLLMR
GDEKMKDISMFLLKCLCSGETLASTPAHEEESCGSDSSDTSIATSAAGAFNVMMSDSEVC
LNKKFHARIKPLYKQRFFSIMMPIFLSKIKEATSMETKLALYQAFGHIISNAPVPAVITE
AHQILLVMVDSLAKLSVEIQDKDLVYNLLLVLSGMLMDEKGKECILDNIHITVSVLTQLV
SYPHMMVVRETALQCLVALSTFPHSKIFPMRLKVLQAAIKALDDKKRAVRQEAVRCRQTW
QSFA
NT seq 3435 nt   +upstreamnt  +downstreamnt
atggcgagggtccccctcggggagtgggttccccacgtcgaggcctacgtcgacgtctcc
cggcccgccgcgcaacactctgccagtgtggatgcgcttgcggccctggtgaacaaggac
aggctggccctcttcgatttggtgtccaagatggaaatgtatttgacaacgacagaccac
attgtgagatcaagagggatactgcttctgggggaaatactgtctcgaatttcagttaaa
tggttagatgtcaataccatcacaactttgtcagatttctttatatcaagattgtcagat
tggcaagcaatacggggggcacttgttggttgcctggcactgttgcacagaaaacaaggt
gttggttgtattgtgtttgctgatgtcaaaagacttgttgagtctttcttacagaatgtc
caagtgcaatcacttgcagctgcagaccgcaagctgtgcttccaaattctgagctgcata
ctggatcgataccctgaagccatcaaaacaatggacggtgagcagctgtactggatctgt
gaagcaattgatgaagaaaaggacccagaatgcttgaagctttcttttcatgtagtggaa
gttgtcatgaagctatttccagatccgtctggtttggcagcgcaatttgcaagcgagttt
tttgagattctgagcaagtattttcctgtctacttcacacacggagcgggtgatgattta
aatgctacaagggatgacctttccagagcattgatgaatgccttttgttccaccccatat
ttcgagccatttgccatccctttgcttcttgataagctttcttcctctcttccgttagca
aagcttgaatctttgaaatatctggacaattgcattcgcttctatggagctgatagaatg
gttagacatgcatcggctgtgtggcttaagttgaaagaagtgatttttagcctttctcca
gagcaacttctactaacatcaggatctgcaaaagatgcagagaagaataagaatcaaatg
gtctcagagactctgaattgtttgaagactgctattacgtatattgattcttcagataaa
gatcttttcatcaatttgatcttgttggatgaggatattgtgaataagatccattctata
tcaagtgcagaaaagtccatattgagttcattggaagatttggcccaagtaaatgcactc
ggaagtgtcatttctattcttgctgaatcatctacatatttctgtactagagtttttcaa
gagcatcttacacacttggtggatattttgggaacctcaactgactatgaatctcggcag
ttgaatacttgtaatggatcatcttctgctgctgtcaactatggagcactctatttatgt
gttcaaatgcttgcatcctgtagagaagtggctttggtatcttatgcagagtgttcttct
cttaaattagcaaaggagtcttggtggcttatcttagagaagaagttggatcagctaatc
catctccttggattatttttaactttagattctcgatctatgcagtcaatgttcagacaa
gaatatgatgcatgtgctgtgaagggcttgctaacactagcaacattcccggaacagtgc
tcacctttacaggcaaatgcttttgaggatattctggctatgcttacctcggtgattaca
agcaagtttgaaaatgtagatttatggagattgtcattgaaagcattgactagcattggt
tcatctatcatcgagttcaatgcttctcaaaaggaagtgatttactgcagaacagttgtt
gacaagattgtttctttgcttgaatcttatgatggttcgatgcctctcagcctaagactt
gaagcaagttatgaagttggaacggctgggttgaaccatatgttaagggttgctaggtca
cttgaaggagctgttgtcactaatatttctaaggctaatggaagaatggaatgtgctgaa
tatgtagcccatttatttgagtgctactctagtcgggtccttccttggttgtttacttca
ggtggtatcaatgaactcgctttgagcttcgcaatgcatctcttggacgagataaaggac
ttatctatgttagatagaatcagttcacagggcctccttgactcactgatgacaggaatg
aagcttttagttggagtctgtacagaggagcaacaaacattgattgttcagaaagcatat
agcatggtatcatcagtgctcccactcccactgaaatcaatgacacgctgtcttttggct
gtagatgagttagttccttcacattctgttcaagaaacagctctgatcggcatgctttca
tcggttatagttggccttcggcttcaaacacctgttccagatatgatagtgatgattaac
ctctttacagtctttctactgaatggacaactgccagctgcttatgcattagcttctatt
ttcaataagtatctacacaatccagagttttcacatgagaatcaactggataaaatattt
gatgatattcttgagaggtgtttctcaactgtattagccaacagctactcaaagatatcc
cactcttctgttgacacttcaaatgatgctaatttcttatatgtgtcctctggaaacata
gcttctaagattgatatcttgtctggcttagcctggattggcaaaggattacttatgaga
ggagacgagaagatgaaggacatttcaatgtttctgcttaagtgtctatgctcaggcgaa
actttggctagtactccagctcacgaggaagaatcttgtggcagtgattcatcagatact
tctattgcaacatctgcagctggcgcattcaatgtaatgatgagtgattcagaagtttgc
ctaaataaaaaatttcatgcaagaataaagccattatataagcagcgtttcttctcaata
atgatgccgatcttcctctctaaaatcaaggaagcaacttcaatggaaacaaagttggca
ctgtaccaagcttttgggcatatcatttcaaatgctccagtaccagcagttataactgaa
gctcatcagattttacttgtcatggttgatagcttagctaaattgagtgtggaaattcag
gacaaggatttggtgtacaatttgttacttgtcctgtctggaatgttaatggacgaaaag
ggcaaagagtgcattctggacaatatccacatcaccgtcagtgttcttacccagcttgtt
tcctatcctcatatgatggttgttcgggagacagcattacaatgtttagtagccctttct
acttttcctcactcaaaaatctttcctatgcggctaaaggttctacaggcagcaatcaag
gctctcgatgataagaaaagggctgttcgtcaagaggctgttcggtgtcgacaaacatgg
cagtcgtttgcttaa

DBGET integrated database retrieval system