Panicum hallii (Hall's panicgrass): 112880551
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Entry
112880551 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112880551 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112880551
Membrane trafficking [BR:
phai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112880551
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112880551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_VPS8
Beta-prop_HPS5
WDR55
Beta-prop_WDR5
Synaptobrevin
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
112880551
NCBI-ProteinID:
XP_025801009
LinkDB
All DBs
Position
2:57701147..57710324
Genome browser
AA seq
1114 aa
AA seq
DB search
MFAKRLFHKALHHHHQQGGGGAPPAAPGGVPQMDAQIALHYGVPYTASILAFDPVQRLLA
VGTLDGRIKIFGGDNIEGILISPKSVPYKFLQFIINQGLLVAVSNENEIQVWNLEFRQLF
YSSQWDVNITAFAAIEWSFLMYLGDENGLLSVLKYEVDDGKLQIMPYNVPIQSLAERAGI
SLQDPQPIVGILIQPDTFGARVLIAYEKGLLVLWDVSDNNAVSVRGYGDLHMKGQITGAQ
RDADEDQLNDAIDGSEEEREICSLCWASRRGSIVAVGYITGDILLWDMNTRTPRQDKQID
VSSNVVKLQLASGSRRLPVIVLHWSAGSAIHSNKGGHLFVYGGDDMGSEEVLTVLSLEST
AGLESVRCMSRMDLKLDGSFADMILIPDTGVPDKSRTSALFILTNPGQLNFYADGSLFSV
QNTKEGNDLPEAQKFPVAVPTIDPNITVTNLCSLTERELSNISLKKFCARQNAGPFILGN
MKWPLTGGVPSVMSLNEDHAVERLYIAGYQDGSVRIWDATFPVLMPMFVLDGKVADIDLA
GANASVSSLAFCSLNMTLAVGTTSGLVRIYKLREHTGGSSFHFVSESKQEVHVVHHEKGF
HCYVAFLASNFPVRSLLFAASGEALATGYQNGQVAMLDLSQLSILFTVDCASGTNSPVVS
SGIYSVTASDTKANESEKESPQKAKLLKDFLLSLTKDGRVTVLDCTAGVMMNSHILDQKQ
SSAISMYVIDGASDGKQTQLSEDPIGSQGHTGKEGNDVDNKQAPGVGKHLKNASHLSQNG
GSDSLLLVCCEDVLLFLSLASLIQGNNKYLHKVKLAKPCCWSAVLKNMDGKICGLILAYQ
TGTIELRSVPDLAIVAESSLMSILRWSYKAGMDKSMSSSNGQITLVNGSEFAIISLMASE
NDFRIPESLPCLHDKVLAAAAEAAISFSTEQRKKQNPAAGILGGIIKGMKGKAEESAKMR
ENFTAQTPSEHLESFFLKDSFVEPSMPILDDPIEELSIDDIEIDDEVPAPASASSSTSHR
NKRATEEEREKLFEGSSDVGKPRMRTPQEILTKYKFGGDAAAAAAHAKDKLMQRQEKLER
ISQQTAELQNGAENFASLAQELAKTMENKKWWKL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaagcgcctcttccacaaggcactccaccatcaccaccagcagggaggggga
ggagcaccaccagctgcacctgggggcgtaccccaaatggacgcgcagatcgcgcttcac
tacggggtgccctacacggcctcaatactcgccttcgatcccgtacagcgcctcctcgcc
gtcggaacgctggatggtaggataaaaatatttggaggtgataacattgaaggcattctt
atatcaccaaagagtgtgccatacaaattcttgcagtttataataaaccaggggcttctg
gttgcagtttctaatgaaaatgaaatccaggtatggaatcttgagttcaggcaactgttt
tattcatcccagtgggatgtcaacattactgcttttgcagccatagagtggtcctttctg
atgtaccttggagacgagaatggtcttctttctgtattgaagtatgaggtagatgatggg
aagcttcaaataatgccatataatgttcctatccagtccttagccgaaagagctggtatt
tccttacaggatcctcaacctattgttggaatattgatccaacctgacacttttggggca
agggtgctaattgcgtatgagaaagggttgctggttctttgggatgtatctgataacaat
gcagtttctgttagaggctatggggatttacacatgaagggtcaaatcactggtgctcag
agggacgctgatgaagatcaattgaacgatgctattgatggcagtgaagaagaaagagaa
atttgctctctttgttgggcatcaagaaggggctcaatcgttgctgttggctatataaca
ggagacatacttctatgggatatgaatacaagaacacccaggcaagacaagcaaatcgat
gtttcatctaatgttgttaagctgcagctggcttcagggagtcggaggcttcctgtcatt
gtattgcattggtctgctgggtcagcaattcattctaataaaggagggcatctttttgta
tatggtggtgatgatatgggatctgaagaagttctcacggttctcagcctggagtcgact
gctggattagaatcagtaagatgcatgtcaaggatggacctcaaacttgacggatccttt
gctgatatgattcttattcctgatactggggttcctgataaaagcagaacttctgcactt
ttcattttgacaaatcctggacaactgaatttttatgctgatgggtctctattttctgtg
caaaatacaaaagagggaaatgatctgcctgaagcacaaaaatttccagttgccgttcct
accattgatcccaacataacagtcacaaatctttgttcactaaccgaaagagaactttca
aatatttcactgaagaaattttgtgctaggcagaatgctggacctttcatattagggaac
atgaaatggcctttgactggcggggttccaagtgtgatgtcactgaacgaggatcatgct
gttgaaaggctatacattgcaggctatcaagatggttctgtgagaatatgggatgcaaca
tttcctgtactgatgccaatgtttgtcttggatggaaaggtggctgatattgatttggct
ggggcaaatgcttctgtatcatctttggccttttgttcattaaacatgactttggctgtt
gggacaacaagtggtctggtacgcatctataaacttcgtgagcacactgggggctcaagc
tttcactttgtgagtgaatctaagcaagaagttcatgttgttcatcacgagaaaggattc
cattgttatgttgcctttttggcatcaaatttcccagtgcgatctctattatttgcagct
tcaggggaagcacttgccacaggctatcagaacggtcaggtggcaatgcttgatctaagt
cagctatcaattctattcactgtagattgtgcatcaggaacaaactcccctgttgtttcc
tcaggcatttacagtgttacggcatctgatacaaaagcaaatgaatcagagaaagagagt
cctcaaaaagcaaagttactcaaagattttcttctttccttgacaaaggatggccgtgtt
actgtacttgactgcacagcgggtgtgatgatgaattcacatatcttagatcagaagcaa
tcatctgcaatttccatgtatgtcatagatggagcttcagatgggaagcaaacccaatta
tcagaggacccaatagggagtcaaggtcatacaggaaaagaaggcaatgatgttgacaat
aaacaagcaccaggagttggaaagcacctgaaaaatgcttcccacctttcacaaaatggt
ggttcagattcacttcttctggtctgctgtgaggatgttttgctttttttatcccttgca
tcattgattcagggaaacaacaagtatctacataaggtgaaacttgcaaaaccttgttgc
tggtcagcagttttgaagaatatggatggcaagatttgtgggttgatattggcttatcag
actggcactatagaattgaggtctgtgccagatctggctattgttgctgagagctccttg
atgtcgatattgagatggagttacaaggcaggcatggataaatccatgagctcctcaaac
ggacaaattactctggtaaatggatctgaatttgcaatcatatctctcatggcctcagag
aatgacttcaggattccagaatctctgccgtgccttcatgacaaagttcttgcagcagct
gcagaagcagctattagtttctcaactgagcagagaaagaagcagaatccagcagcagga
atccttggtggaatcattaaaggaatgaaaggcaaggctgaagaaagtgcaaaaatgaga
gaaaacttcactgcgcaaacccccagcgaacatttggagtcatttttcttgaaagattca
tttgttgaaccatcaatgcccattcttgatgacccgatagaagaactgtcaatagatgac
atagagattgatgacgaagtacccgccccggcatcagcatcatcctctacatcccacagg
aacaagagagcaacagaggaggagagagagaagctttttgaagggtcaagcgatgttggt
aaaccaagaatgagaactccgcaggaaattctgacaaaatataaatttggcggggatgca
gcagctgctgctgctcatgccaaggataagctgatgcagcggcaggagaaactggagaga
ataagccagcaaaccgcggagcttcagaatggagcagaaaactttgcttccctggcgcag
gagcttgcgaaaaccatggagaacaagaagtggtggaagctataa
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