KEGG   Panicum hallii (Hall's panicgrass): 112880611
Entry
112880611         CDS       T07366                                 
Name
(RefSeq) histone deacetylase 5-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phai03036]
    112880611
Enzymes [BR:phai01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112880611
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     112880611
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112880611
NCBI-ProteinID: XP_025801113
LinkDB
Position
2:53996732..54004174
AA seq 701 aa
MAAAPAPPAARAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLNAEGVASRCVVL
KAKEAEDKYIASVHSNNHIKLMKEISSKKYDSSRNKIARKYNSIYFNKGSSESAVLAAGS
VIEVAEKVAAGELRSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNDRPDLGIKKI
LIVDWDVHHGNGTQKMFYNDPRVLFFSVHRFDYGSFYPSEGDGSHCFIGEESGKGYNINV
PWEHGKCGDADYIAAWDHVLLPVTEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLL
TKLLGFAKGRIVMALEGGYNLRSIANSVFACAKVLLGDKFTFSSPEMQPFESTWRVIQAV
RDELKTYWPVLSSKLPENLSLRIKPSPSELYASSDSEPDGEDVDELSGALSSVNVIQFAD
DAISEHLSKMKLDEENLAVKTASSCSTAEHHPTDSVEVDIDGSVVLSKRISDLSLAWRSD
LSRTHVWYASFGSNMWKPRFLCYIQGGKAEGMSIPCCGSRDTSSPRGTMWKTVPHRLLFG
RSFTPCWGTGGVAFLNPEINYNEKSYVCMYKITLEQFNDILFQENRLVLEDGKNGNVVYP
DSPLIGSYEVEFMSTNKAIHLEPIKDSWYSNVLYLGDEDELPILTMTCPSSDIERYKSGE
LPLAPPSKTYAATLIKGLVEGKQLDADGGASYINAAAARGL
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcggcggctccggctcccccggcggcgagggcggcgcgggtggggctgctctacgac
gagcggatgtgcgcgcacgcgacgcccgacggggaggagcacccggagaaccccgagcgg
ctgcgcgccatctggcggaagctcaacgccgagggcgtcgcttccaggtgtgtggtcctt
aaggcgaaggaagctgaggacaagtatatagcttctgttcatagcaataaccatataaag
ctgatgaaagaaattagctcgaagaaatatgattccagcagaaacaagattgctaggaaa
tataattccatttacttcaacaagggttcctcggagtctgctgttcttgcagctggttct
gtcatagaggtagctgagaaagttgctgcaggtgagttacgttctgctattgcactagtc
agacctccaggccatcatgccgaacatgatgaggcaatgggattttgcctcttcaacaat
gtggcagttgcagctaattatctcttaaatgacaggcctgatttaggtatcaagaagata
ctgattgtcgattgggatgttcaccatggaaatggcacacagaaaatgttttacaatgat
cctcgtgtattgttcttttcagttcacagatttgattatggaagcttctatccttctgaa
ggggatggttctcattgtttcatcggagaagaatctggtaaagggtataacattaatgtt
ccttgggagcatgggaagtgtggtgatgccgattatattgctgcatgggaccatgtattg
cttcctgtcactgaagcttttgaccctgatataatactggtatcggctgggtttgatgca
gcattgggtgaccctctcggtggttgctgcatcacaccaaatggatatgcactgctacta
acaaagttattagggtttgctaaaggaaggatagtgatggcccttgaaggaggttataac
cttaggtccatagcaaattcagtttttgcttgtgcaaaagtcctcttgggagacaaattc
acattcagctccccagagatgcagccatttgaatctacatggagagttatacaagcggta
cgcgatgaattgaaaacatactggcctgttttgagtagcaagctgccagagaatttatca
ttgaggattaagccttcaccaagtgagctctacgcgtcctctgattctgagcctgacggt
gaagatgtcgatgagctctctggtgctctttcatctgtcaatgtcatccaatttgctgat
gatgctataagtgaacacctctcaaaaatgaaacttgatgaagaaaaccttgcagtgaag
actgcctcaagttgctcaacagcagaacatcatccaactgattccgtagaagtagatata
gatggatctgtggtactgtccaaaagaatatctgatttgtctctggcttggcgatcggat
ttatcaagaactcatgtctggtatgccagctttggttcaaacatgtggaagccaaggttt
ctatgctatattcaaggggggaaggctgagggtatgagtataccatgctgtggatcacgt
gacacaagctcaccaagaggaaccatgtggaagactgtgcctcataggctgctttttggt
agatcatttaccccttgctggggaactggtggtgttgctttcctcaaccctgagataaac
tacaacgagaagtcttatgtctgcatgtacaaaataacgctagagcagttcaatgatatc
ttgtttcaagagaaccgtttagtgctggaggatggcaaaaatggaaatgttgtgtatcct
gattctcctttgattggttcatatgaagtggagtttatgtctacaaacaaagctattcat
cttgaacctatcaaggatagctggtactccaatgtactttatcttggggatgaggatgag
cttccaattcttactatgacgtgcccctcatcagatattgagcgctacaaatctggcgag
ctgcctctagcacctccttcaaagacctatgctgccactctgataaagggattagtggaa
gggaagcaactggatgcggacggaggtgccagctacatcaatgctgctgctgcaagaggc
ttgtga

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