Panicum hallii (Hall's panicgrass): 112880667
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Entry
112880667 CDS
T07366
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
phai03012
]
112880667
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112880667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
112880667
NCBI-ProteinID:
XP_025801185
LinkDB
All DBs
Position
2:8785913..8801762
Genome browser
AA seq
1923 aa
AA seq
DB search
MAPKSKRGKAKGEKKKKDEKVLPVAIDITVNLPDQSHVILKGISTDRIIDVRRLLCVNTA
TCAITNYSLTHETRDGQLKDAAEIATLKPCTLTLVEDDYSEESAVEHVRRLLDIVACTTS
FGPAPPPPPPPSPKDADAAKEPSSSSATSKGAASGSSGGRRTASPPPASPSKESSAAKEA
AAKESAAAAELEAEMSGACPRLGAFYEFFSLANLTPPLHFIRRVSQPRQEEQPSDDHLFF
LEAKLCSGKFVVVEARRKGFFSLGKQHVLCHNLVDLLRHLSRAFDNAYEDLMKAFLERNK
FGNFPYGFRANTWLVPPIAAQSPSTFPPLPAEDENWGGSGGGWGRDGRSDMLPWADEFLY
LTSMPCKTAEEREIRDRRAFLLHSLFVDVAIFRAIAAVRHVMESTGISASTKIDEVLYSE
TVGNFSITVTRDSSDASCKLDTKIDGSQATGMDSKDLAERNLLKGITADENTAAHDVDSL
GIINLRYCGYVAVAKVTDIDKAKVTSSIKPINIADQPEGGAHALNINSLRMLLNEANSTG
EKKISSLSQNHRHEELTTAQTFVEKLLKESLQKLEEEENEKQSFMRWELGACWVQHLQDQ
KNSDKDKKQGGEKDKKKTVDKSMKETKIEGLGKPLKALKNSKNAGTADTGSSLGTKSSAE
SQKDKPIELPQGESNASENENLLKDLLPESAFTRLKESETGLHQKSPSELIEMALKYYDE
VALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGRVVKLSEKLSHVQSLCVHEMIV
RAFKHIIRSVIAAISDTRQLALTIAAALNLLLGVPESDVSGSCPSVHPLVWRWLVTFLKK
RYKFELTEKHYNDVRKYAILRGLCHKVGIELAPRDFVMDSAFAFHKQDIISLVPVHKQVA
CSSADGRQLLESSKTALDKGKLEDAVNYGTKALSKLITVCGPYHRMTAGAYSLLAVVLYH
TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLL
HLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGPDHIQTAASYHAI
AIALSLMEAYSLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKVIEQQEAARNGT
RKPDASIASKGHLSVSDLLDYINPNQENKGRDSESGKRRYSSIKVLSHSNESSNGASPEI
SPRDSTPIIDEEQQVKELSKDDGTDVISEAEVKQSPKSFEQPAPSELPLEIPKVNINVPK
EVLQDETAEPEDGWLPVQRPKSAGGPGKQIKHYRPTTRKVYDPDSHDPTYTSQYKARNSY
PNNRYYFLRKRTVVPTTYTDPQQHVKVQTSGARFGRKIYKAVTYRVKPGTAPTDVQDTKS
AEQVSGKAESQVTYSQAHNLTSIDHKESELHGASVASSGNAPSYKDVALARPGTIAKTQI
QKSRDDVPQNQPSLGQIIAQEMKDSLVDSLQVEQRPVSSNANNPKEVANVAEQIQQSEET
KFSGREPEIENIGKDGSQNLLMSVAGSESGNSKEDANVFSNTSQEPSSGGNDGAAIEFSE
STGSAKAEQSGKSDMEIFEALPSSIEPISDSASTTNTGSLVGVASEKSKPNLLLSNIDLR
EMPNKKLSAAAPPFNPSPPAVLSPLAGNVGLPPTGTMPGVAPWPVNVSLHPGHSTMVPSG
PPMCTSPHHLYPPAPRSPNLMHPVPFIYPPYSQPQVVPSTTFPMNTIFRPNHYGWQPYMG
SAPSEFAPVSAWSSGHTIDFTPPPHVVDPISQSLADKHIQSDAAVVSIGPSLDSNAVAAK
GEMETPAVVGSENFISNKHDDQDKQLKDAVRIELNPDMNAENSHDIGVTNQSQSNMKNED
EGSFRIYVKGKSRRKQTLRIPISLLNKTYGSRSFKLVYNRVVRENDIFRPSNVSFAEVVS
SGN
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctaagagcaagcgcgggaaggccaagggtgagaagaagaagaaagatgagaaa
gttctcccagtggccattgacatcaccgtgaacctcccggaccagtctcatgtcattctg
aaggggatttcaacggacaggatcatcgatgtgaggcggctgctctgcgtcaacaccgcc
acatgcgccatcacaaactactccctcacacatgagacacgtgatggccagttgaaggat
gctgctgagatagcgacgttgaagccttgcacgctcaccctggtggaagatgactacagc
gaggagagtgcggtggagcacgtccggcggctgctggacatcgtcgcctgcaccacctcc
ttcggccctgcgccgccacctccgccgccgccgtcccccaaggacgccgatgccgccaag
gagccctccagctccagcgccacctccaagggcgccgcctccgggtcctcgggcgggcgc
cgcacggcctcgccgccgccggcgtcgccgtccaaggagtcttcggccgcgaaggaggcg
gcggccaaggagtccgcggccgcggcggagctggaggccgagatgagcggcgcgtgcccc
cgcctcggcgccttctacgagttcttctccctcgccaacctcacgccgccactccacttt
ataaggcgagtgtcacagccccggcaggaggagcagccttcggatgaccatctgttcttt
ctcgaggcaaagctttgtagtgggaaattcgttgttgttgaagctcggagaaagggattc
ttcagtttggggaagcagcatgtcttgtgccataaccttgtcgaccttctgaggcatctt
agtagagcatttgataatgcttatgaagatcttatgaaggcatttttggaacgaaacaag
tttggaaattttccttacggatttcgtgcaaacacatggcttgttcctccaattgctgcc
cagtcaccatcaacgtttcctcctcttcctgctgaggatgaaaactggggaggcagtgga
ggtggttggggaagggatggcagaagcgatatgttgccatgggcagatgaattcctttat
ctgacatctatgccttgcaaaactgctgaggagagggaaatccgtgacaggagagcattc
ctactacacagcctctttgtagatgttgccatctttcgggctattgcagcagtaaggcat
gtaatggagagtacagggatatcagcatcaaccaagatagatgaagttttgtattctgag
acagtgggaaattttagcatcactgtcacaagagattcttcagatgcaagctgcaagttg
gacactaagatagatggaagccaagcgacaggaatggactctaaggatcttgctgaaagg
aaccttttgaaaggaataacggcagatgaaaacacggctgcccatgatgttgacagtttg
ggcattatcaaccttaggtattgtgggtatgttgcagtagcaaaggttactgatatcgat
aaagccaaagtgacctcttctattaagccaataaatatagcagatcaacctgaaggtggt
gcacatgcattgaacattaacagtttgaggatgctccttaatgaagccaattcaactgga
gagaaaaagatatcaagcctttcacaaaatcataggcatgaagaactaactacggcacaa
acttttgttgagaaattgttgaaggaaagtcttcaaaagctcgaggaagaggaaaatgag
aaacaatcatttatgagatgggaacttggtgcctgctgggttcagcatttgcaggatcag
aaaaattctgataaggataaaaagcaaggtggtgagaaggataagaagaaaacagtggac
aaatctatgaaagagacaaagattgaagggctagggaagcctttgaaagcccttaagaac
tcgaaaaatgctggtactgctgacacgggatcctcattggggaccaaaagctctgcagaa
agtcagaaagacaaacctattgaattaccacaaggagagtctaatgcttcagagaatgag
aacctgctgaaggatttattaccagaatctgcctttacaaggttgaaagaatcagaaact
gggctccaccagaagtcaccttctgagttgattgagatggctctaaagtactatgatgaa
gtcgcgcttcctaagctggttgctgattttggttctctggagctttcacctgttgacggt
agaactttgacagatttcatgcataccagaggcctacagatgcgctctctaggacgagtt
gtcaagctttcggagaagctttcacatgttcagtccctatgtgtgcatgaaatgatagtg
cgagcattcaagcacatcattcgatctgttattgctgctatttcagacacacgacaatta
gcactaacaatagccgcagctctgaacttactgcttggtgttcctgaatctgatgtctct
ggaagttgtcctagtgtgcatcccctagtatggagatggctggtgacattcttgaaaaag
agatataaatttgagctcacagagaaacattacaatgatgtgaggaaatatgctatactg
agaggactctgccataaggtgggcattgaattggcaccccgagatttcgttatggattct
gctttcgcattccataagcaggacattattagcctggtacctgtacataagcaagtcgca
tgctcatctgcagatggaaggcaactgctagaatcctctaaaactgcccttgacaaggga
aaacttgaagatgctgtcaattatgggaccaaggctctttctaagctcataactgtgtgt
ggtccctaccatcgaatgacagctggagcttatagcctgctagccgttgttttgtaccat
actggtgattttaatcaggctactatttatcagcaaaaggccctagacatcaatgagagg
gaacttggacttgaccaccctgatacaatgaagagttatggagaccttgctgtattctac
taccgtctacaacatacagaattggctctaaagtatgtcaagcgtgcgttatatcttctg
catcttacgtgcgggccatctcatccaaatacagctgctacatatatcaatgtagccatg
atggaagaaggattgggcaatgtgcatgtagctctcagatacttgcacaaagctttaaaa
tgcaaccagaaattacttggccctgatcatatacagactgctgccagctaccatgctata
gccatagctctctcgttgatggaagcttattccttgagtgttcagcatgagcaaacaacc
ttacagatccttcgtgcaaagcttggaccagatgacctacggactcaggatgctgctgcc
tggcttgaatactttgagtccaaagtaattgagcaacaagaggctgcacggaatggaact
cggaaacctgatgcatcaatagctagtaaaggacacctaagtgtgtctgatcttcttgat
tacataaatcccaaccaagagaacaaaggaagagattctgaatctggcaaacggagatac
tccagtataaaggttttatcacattcaaatgaaagttcgaatggagcaagtcctgagata
tctccgagggattcaactcccattatagacgaggaacagcaagttaaagagctgtcaaaa
gatgatggtactgatgttatatctgaagctgaggttaaacagagtcctaaatcgtttgag
caaccagcaccttctgagctaccactagagatacccaaggtgaacattaatgtacctaag
gaggttcttcaagatgaaactgcagaacctgaagatggttggctgcctgttcaaagacct
aaatcagctggaggaccaggaaagcagataaagcattaccgtcccaccaccagaaaggtg
tatgaccctgatagtcatgatccaacatatacttcacaatacaaggctaggaattcctat
ccaaataatcggtattatttcttaaggaagagaactgtcgtacctacaacatatacagat
cctcagcagcatgtgaaagtccagacatcaggtgccaggtttggtcgcaagatttacaag
gctgtgacctatagggttaagccagggactgcgcccacagatgtccaagatactaagagt
gcagagcaggtgagtggtaaagcagaatcccaggtgacatactcacaagcacacaatctt
acctcaatagatcacaaagaaagtgagctacatggagcttcagttgcaagtagtggaaat
gctccatcatacaaagatgttgcattggcacgtcctggaacaattgccaagactcaaatt
cagaaatctagagatgatgtaccgcagaaccaaccatcacttggtcaaatcattgcacaa
gaaatgaaggattctttggttgattcacttcaagtggaacagagacctgtctcttcaaat
gccaataatcctaaagaagtagccaatgtagcagaacaaatccagcaatcagaagaaact
aaattctctggaagagaaccagagattgagaatataggcaaagatggttcacaaaatttg
ctgatgtctgtagctggaagtgagtctggaaatagtaaagaagatgccaatgtgttcagt
aacacaagtcaagaaccatcaagtggtggcaatgatggtgcagccattgagttttctgag
tctactggatctgctaaagctgaacagagtgggaagtctgacatggaaatttttgaagct
ctgcccagcagtatagaacctatatcagattcagcatccacaacaaacacagggagtctt
gtaggtgttgcaagtgagaagtccaagcctaacttattgctgagtaatattgatttgaga
gagatgcctaataagaagctatctgctgctgccccaccatttaatccatctccaccggct
gtacttagcccccttgctggaaatgttggtctcccgccaacaggtaccatgccgggagta
gcgccttggcctgtgaatgtatccctgcatcctgggcattcaactatggtgccaagtggt
cctcctatgtgcacttcccctcatcatttgtatcctcctgccccccggtctccaaatctc
atgcatcctgtgccatttatttatccaccatatagtcaaccacaggtggttccaagcacc
acatttcccatgaacactatttttcggcctaaccattatggatggcaaccttatatgggc
tcagctccatcagaatttgcgccagtgtcagcatggtcaagtggccatacaattgacttc
acccccccgccacatgttgttgaccccatttcacagtctttagcagataagcatattcaa
tctgatgcagctgttgttagtataggaccttcactggacagtaatgctgtagcggccaaa
ggggaaatggagactcctgcagtggtaggaagtgaaaatttcatcagcaacaaacatgat
gatcaggacaaacaattaaaggatgcggttagaattgagctgaatcctgacatgaatgca
gagaacagtcatgacattggtgtaacgaatcaatcgcaaagcaacatgaagaacgaagat
gaaggtagtttcaggatatatgtaaaggggaaaagccggcggaaacaaactctgagaatc
ccaataagtttgcttaacaagacatacggatcacgttctttcaagcttgtctataacaga
gtagtaagagagaacgacatcttcaggccttcgaatgtgtcctttgctgaagttgtttca
tctggcaactag
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