Panicum hallii (Hall's panicgrass): 112880811
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Entry
112880811 CDS
T07366
Name
(RefSeq) aladin-like
KO
K14320
aladin
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112880811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112880811
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112880811
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
112880811
NCBI-ProteinID:
XP_025801345
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Position
2:6325025..6328293
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AA seq
339 aa
AA seq
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MAPASKDGNGYEIPAYPRILNPVGAGFPYFHPAIPDVPIPSRHPVFPPARLRPPPSAPPP
APRSATHPRAPAPGSVPCPALRHPPPPPPPAQAPPRGSARAKLRRVPREPACGYMGVPAV
FTYLASASCNSPSFTIWDVSQGLGTPIRRGLSNISLLRWSPSGDYLLAAKFDGTFHFWET
NTWTSEPWSSSNGYVSGANWDPEGRVALVSFSNSTTLGSIHFSSKPPCLDAHLLPVELPE
ISSLIVSRGIEKLSWDASGERLALSFKDGNGMYRGLVAVYDVRRSPLVSVSLVGFIRGPG
EGVKPLAFAFHNKFKQGPLLSVCWSSGWCCTYPLILRSH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggctccagcaagtaaggatggcaacgggtatgaaatacccgcgtacccgcggatacta
aacccggtgggcgcggggtttccatacttccatccggccatccccgacgtcccaattccc
agccgccaccccgtcttcccgcccgcccgcctccgtccgcccccatccgccccgccgccg
gccccgcgctccgccacccacccccgcgccccggcccccggctccgtcccctgccccgcg
ctccgccacccacccccccccccccccccggcgcaagctccgccgcgggggagcgcccgc
gccaagctccgccgcgtcccgcgtgagccagcttgcgggtacatgggcgtgcccgcggtc
ttcacatacttggcatctgcctcctgtaatagtccatctttcacgatttgggatgtgtct
caagggttgggtactcctatacggcgtggattaagtaatatatcactactgcggtggtca
cctagtggagattatcttctagctgctaaatttgatggaacttttcacttctgggagaca
aacacatggacttcagaaccttggtcttcatctaatggatatgtgtctggagcgaattgg
gacccagaaggtcgtgttgcattggtatccttttctaactctactacacttggctcaatt
cacttctcatctaagccaccatgtttagatgctcatctcctaccagttgaacttccagaa
atttcctccctgattgtcagccgaggcatagaaaaattatcatgggatgcttcaggggag
cgtctggcattgtcgttcaaagatggaaatggaatgtaccgtggtcttgttgctgtatat
gacgtgaggagatctccacttgtctcagtatcactagttgggttcattagaggacctgga
gaaggagtgaaaccacttgcttttgcttttcataataaatttaagcaaggacccttgctt
tctgtgtgctggagcagtggctggtgctgtacatatccactgatactccgttctcattaa
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