Panicum hallii (Hall's panicgrass): 112881097
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Entry
112881097 CDS
T07366
Name
(RefSeq) probable protein transport Sec1b
KO
K15292
syntaxin-binding protein 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112881097
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112881097
Membrane trafficking [BR:
phai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112881097
SNARE
SNARE associated proteins
Syntaxin-binding proteins
112881097
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112881097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
112881097
NCBI-ProteinID:
XP_025801586
LinkDB
All DBs
Position
2:43906290..43913959
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AA seq
655 aa
AA seq
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MSMDFGAPADDPKVFRNICRDRILKDLLKPDKDKETKSSWKVLIMDKFTVKIMGYACKMA
EITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSP
IPKELVSYIKNDSSVIPRIGALREMNLEFFTIDMQGFVTDHDSALNDLYGPSEQNSKMFN
DTISTMATRIATTFASLKEFPCVRYRAPKGDASATTKFDMVPKWLATAVWDIVSKYKSTI
PEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGTKYIYEVSKAGSEPEQKE
AVLEDHDPLWLELRHAHIADASERLYEKMNNFVSKNKAAQLHSRDGGEISTRDLQKIVQA
LPQYSDQVEKLTLHIEIAGKINRFIREYGLRDIGQLEQDLVFGDAGAKEVISMLRSKQDM
SPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDDMDVIKCLRYLEGVDTKKSSRTG
TFSLKFDAQKKKNAARVEKQDGEETWALSRFFPLIEELIEKLSKGELPLKEYPSMGEPSS
APQGATQTASTAGPPQNPQPMSMRSRRTPQWAKSRTSGDSQSSDSSVLRHSSGEFKRLGN
RIFVFMIGGATRSELRTVHKLTMKMKREIVLGSSSIDDPPQFISKLKSIGSAANK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggacttcggcgccccggcggatgaccccaaggtcttccgcaacatctgccgc
gaccggatactgaaggacttgctgaagccggacaaggataaggagaccaagagctcctgg
aaggttcttataatggataagtttacagtgaagatcatgggttatgcttgcaagatggcg
gaaattaccgacgcggggatttcgttggtcgaagatctgttcaagagaagggagccgatg
ccttcaatggatgcaatctactttctgcagccactgaaagaaaatgtcataatgcttctc
tccgatatgtctgggagatgtccactgtacaggaaggcatacatcttctttagttcaccg
attcctaaggagctggtatcttacataaagaatgacagcagtgtaataccacggattggt
gcactaagagagatgaatttggaattctttactattgacatgcagggcttcgtaactgac
catgattcggcgctgaatgatttatatggcccaagtgaacagaattccaaaatgttcaat
gatactataagcacgatggctactcgcatcgcgaccacatttgcatcattgaaagaattt
ccatgtgtgcggtatcgggccccaaaaggagatgcttccgcaactactaaatttgacatg
gttccaaagtggcttgctactgctgtttgggatattgtgtcaaaatataaatcaacaatt
cctgaatttccccagaaggagacatgtgaactgctcattgttgacaggcctatagatcag
atagcacctgttattcacgaatggacctatgatgcaatgtgccatgatctacttgaaatg
gatggtaccaaatacatatacgaggtatcaaaggcaggttcagaacctgaacagaaggag
gctgtattggaggatcatgatcctctttggcttgagcttcgccatgctcacatagctgat
gctagcgagagattgtatgaaaagatgaataattttgtttccaagaataaagcagcacaa
ctacattcaagagatggtggtgaaatctcaacaagggatctgcagaaaatcgttcaagct
ttgccgcaatatagtgatcaagttgagaaattgacactacatatagagattgctgggaaa
attaataggtttatcagggagtatgggctccgtgacattgggcagctggagcaggatctg
gtttttggagatgcaggagcgaaggaggtgatcagcatgcttaggtcaaagcaggatatg
agtccagaaaacaaattgaggttgctgataatatatgcaattgtatatccagaaaagttt
gaaggtgacaaaggggaaaagttgatgcagctagcaaagcttccacatgatgatatggat
gtaataaagtgtttaagatacttggaaggtgtagatacaaaaaagtcatcaaggaccggt
actttctctctaaaatttgatgcgcaaaagaagaaaaatgctgccagggtagaaaaacag
gatggggaggaaacatgggcgttatcacgatttttcccacttattgaggagctaattgag
aaactgagcaaaggtgaattacctctgaaagaatacccatctatgggtgagccaagttct
gctcctcaaggtgccactcaaacagcatcaacggcaggaccaccacaaaacccacaacca
atgtctatgaggtcaaggcggacaccacaatgggctaagtctcggacctctggcgattct
caatcaagtgattcttcagtcttgagacactcatcaggtgaattcaagaggctaggcaac
cggattttcgtcttcatgattggtggagccactagatctgaattgcgcacggtgcacaag
cttacaatgaaaatgaagcgcgaaatcgttttgggctcatctagcatcgatgaccctccg
cagtttatttcgaagctgaagtcgataggtagcgccgctaacaagtag
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