Panicum hallii (Hall's panicgrass): 112881232
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Entry
112881232 CDS
T07366
Name
(RefSeq) putative aconitate hydratase, cytoplasmic
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00020
Citrate cycle (TCA cycle)
phai00630
Glyoxylate and dicarboxylate metabolism
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
phai01200
Carbon metabolism
phai01210
2-Oxocarboxylic acid metabolism
phai01230
Biosynthesis of amino acids
Module
phai_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phai_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
phai_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
112881232
00630 Glyoxylate and dicarboxylate metabolism
112881232
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
112881232
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
112881232
NCBI-ProteinID:
XP_025801696
LinkDB
All DBs
Position
2:50893979..50902569
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AA seq
1476 aa
AA seq
DB search
MNLPSICQCKAIITCSNLPKTKCPNPSRSTGPRAPSPSPSPACGRRRPRCWTATTFFLWY
CAASRRGPPPSPAPPSSAGDGATSSPPGTSSAISASSTARRRSSAYSTTPTSAPPTAASS
PPSTRLTVSRTRSSACRAAGTTGAGGSWTAATAGRSSSARWAPAARSSFLVWFELGLTYL
RRAVAAVYSSESGAWSHIITVQAPFVSTASNASKPGTLAGNAVYWLIPGSRVLEFDAVTR
NLAVISVPAYTAGSLYWQCQLMPTDAKELGLAMVTEISIKLWKRDSGNACGWSMYSAVQL
EGCLPPRKWMQEQPSLLGYHEESNAIFVWIEAGVFMIQLESMQSRLMCQGASNFEIYPFA
GFYNRGDATAGAQGDEDVDARWPTAIVDMWHYEDPQGDSHGPYSMVSLQRWSGNGFFAED
FRVWRTDETKEQAILLTDAMLSLSLVLANLMRTPARGPSRALLALPFPSKAAFLSAGSGS
SNPLSLADRRSTATMYRAAASTLRHSLCRLPCTTSSAAATRPLAGAARFLATSSERRLPA
PASSRPLGAAAARGSCSGAAVTERPASAWRGLATMADSNSRFGHVLTSLPKPGGGEYGKY
YSLPALNDPRIERLPYSIRYLLESAIRNCDGFQITEKDVENIIDWENTAPKLVEIPFKPA
RVLLQDFTGVPAIVDLASMRDAMDRLGDDPGKIDPLIPVDLVIDHSVQADVVKSENALQS
NMQREFDRNKERFAFLRWGSMAFNNMLIVPPGSGIVHQVNLEYLGRVVFNTDGILYPDSV
LGTDSHTTMIDGMGVAGWGVGGIEAEATMLGQPMSMVLPSVVGFKLSGKLRDGVTATDLV
LTVTQILRKHGVVGKFVEFHGEGMSELAVANRATIANMSPEYGATMGFFPVDHVTLEYLK
LTGRSDEKVEMVEAYLRANNMFVDYNETQTERAYSSYLELDLADVEPCVSGPKRPHDRVA
LKDMKADWHACLSNKVGFKGFGVPKEQQDKVVKFSFHGKPAEIGHGSVVIAAITSCTNTS
NPSVMLGAGLVAKKACELGLEVNPWIKTSLAPGSGAVTKYLQKSGLQKYLDNLGFNLIGY
GCTTCIGNSGELDEDVAKAITDNDIIAAAVLSGNRNFEGRIHALVRANYLASPPLVVAYA
LAGTVDIDFEKEPIGKGRDGNDVYFKDIWPSNEEIAEVEQSSVLPDMFRSTYEAITQGNP
MWNQLSVPKAKRFPWDPNSTYIHDPPFFKDITPTPPGPRSVENAYCLLKFGDSITTDHIS
PAGSIPRDSPAGKYLLERGVQPKDFNSYGSRRGNDEVMARGTFANIRIMNRLLNGEVGPK
TVHVPTGEKLFVFDAAMRYKADGYHTIVLAGEEYGSGSSRDWAAKGPMLLGVKAVIAKSF
ETIHRSNLVGMGVMPLCFKPGEDADSLGLTGHERFTIRLPSNVSEIQPGQDVEVVTDSGK
SFTCKLRIDTLVELAYFDHGGILHYVLRNLVKQQQR
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgccgtcgatctgccagtgcaaggccatcatcacttgctcgaatctgcccaaa
acaaaatgtccgaacccgagccggagcacgggcccgagggccccgagcccgagcccatcc
cccgcttgcggccgtcgtcgtcctcggtgctggacagcgacgaccttcttcctgtggtac
tgcgccgcctcccgccgcggccctcctccctcccccgcgcctccctcgtctgcaggcgat
ggcgcgacctcgtcacctccagggacttcctccgcgatttccgcgagttccaccgcgcgc
cgccggtcctcggcttattccacaacacctacctcggcgcccccgaccgccgcttcgtcg
ccgccgtcgacccgcctgaccgtgtcccggactcgctcttccgcatgccgtgcggccggg
accaccggagctggaggttcctggactgccgccacggccgggcgctcctcctcggcccga
tgggcccccgccgcgaggtcctcgttcctggtgtggtttgagctggggttgacatatctc
aggcgggctgttgctgccgtctactcgtcggagtccggcgcgtggagccacatcatcacc
gtgcaggcgcctttcgtgtctactgccagcaacgcgagcaagcccggcacgcttgccggc
aatgccgtctactggttgattccggggagccgcgttcttgaattcgatgcggtgacacgc
aatttagctgtgatatcggtgccagcatatacggcagggtcactctactggcaatgccag
cttatgccgactgacgcgaaggaacttgggctcgccatggtgacagaaatcagcatcaag
ctgtggaagagggacagcgggaacgcctgtggatggtcgatgtacagcgcagttcaactg
gagggctgcctccccccgaggaaatggatgcaggaacagccgtcgttgctggggtatcat
gaggaaagcaatgcaatttttgtgtggattgaggctggcgtgttcatgatccagctcgag
tcgatgcagtcaaggctgatgtgccaaggtgccagtaacttcgagatttatccctttgcg
ggtttctacaacagaggtgatgccacagcaggagcgcaaggagatgaggacgtagacgcc
cgctggcctacggccattgtggacatgtggcactatgaggaccctcagggggactcgcac
gggccatactcgatggtgagtctgcagcgatggagcggcaatggtttcttcgccgaggac
tttagggtgtggagaaccgacgagactaaggagcaggcgatcctgctgaccgacgccatg
ctgagcctgagcctggtcttggcgaatttgatgcggacccctgctcgcggaccttctcgc
gcgctgttggcgcttccctttccctccaaagcagccttcctttctgccggcagtggcagc
tccaaccccttatcactcgctgatcgccgcagcacagcgacgatgtacagagcggccgcc
tcgacgctccgccatagcctctgccgcctcccctgcaccacctcctccgccgcggccacc
cgcccgctcgctggggccgcccgcttcctcgccacctcctccgagcgtcggctccccgcg
cctgcctcgtcccgccccctcggagcggcggccgcgcgcgggagctgctcaggcgctgcg
gtcacggagcggccagcatctgcgtggcgcgggctcgccaccatggcggatagtaatagc
cgcttcggtcatgtcctgacaagcctcccgaagcctggtggcggagagtacgggaagtac
tacagtttgccagcactgaatgatccaaggatagaaagattgccatactctatacggtat
ctgcttgagtcagccatccgcaactgtgacggttttcagatcacagagaaggatgttgag
aatataatcgattgggagaatactgctcccaagttagtggagataccgttcaagcctgcc
cgtgttcttctgcaggattttactggcgtcccagctattgttgaccttgcaagcatgcgt
gatgctatggaccgactgggtgatgatcccggcaagattgaccccctgattccagtggac
ctagtaattgatcattcggtacaagctgatgtggtaaaatcagagaatgctcttcaatct
aatatgcagcgtgaattcgacaggaacaaggagcgctttgccttccttcggtggggctct
atggcattcaataatatgcttattgttccaccaggttcaggaattgttcaccaggtgaat
cttgaatatcttgggagagttgttttcaacaccgatggtattttatatcctgacagtgtg
ctggggacggattctcacacgaccatgattgatggaatgggagttgccggctggggtgtt
ggggggattgaagcagaggcaacaatgcttggtcagccaatgagcatggtcttgcctagt
gtagttggatttaaactgtcagggaaattgcgcgatggtgttactgcaactgacctagtc
ttgacggtgacacaaattcttaggaagcatggtgttgttggcaagtttgttgagtttcat
ggtgaggggatgagtgagctagcagttgctaacagggcaacaattgctaacatgtcacca
gagtatggcgcaacaatgggcttcttcccagttgatcatgtgacccttgaatacttgaag
ctgacagggagaagtgatgaaaaggttgagatggtggaggcatatcttcgagctaacaac
atgtttgttgactacaacgagactcaaacagaaagagcttactcatcttatcttgagtta
gacctagcagatgttgaaccatgcgtttcaggtccgaaaagacctcatgaccgtgttgct
ctgaaagatatgaaagcagattggcatgcctgtctcagtaataaagttggttttaagggc
tttggtgtacctaaagagcaacaggataaagtcgtgaagttctccttccatggaaaacct
gcagagattggacatggtagtgttgtgattgctgccataacaagttgcacaaacacctcg
aatccaagtgtcatgcttggtgctggccttgttgcaaagaaggcgtgtgagcttggcctt
gaggttaatccatggattaaaactagtcttgctccaggatctggggcagtgaccaaatat
ctgcagaaaagtggcttgcaaaagtatttggataatctgggtttcaacttaattggatat
ggctgcacaacatgcattggtaactctggggagcttgatgaagatgttgctaaggcaatt
actgacaatgacatcattgctgctgcagtactctctggcaacaggaacttcgaaggacga
attcatgcattggttcgggccaattatcttgcctcccctcctctggttgtggcctatgcc
cttgccggcactgttgatattgattttgagaaggagccaattgggaaaggaagagatgga
aatgatgtgtacttcaaggacatatggccatcaaacgaagaaattgcagaggttgagcaa
tcgagtgtgctgcctgacatgtttaggagcacctatgaagcaatcacgcagggcaaccca
atgtggaaccagttgtccgttccaaaagcaaaacgcttcccatgggaccctaactccacc
tatattcatgatcctccattcttcaaggatataacaccgactccaccaggtccacgcagc
gtagagaatgcctattgcctgctaaagttcggtgacagcatcacaactgaccacatctca
ccagctgggagcatccccagggacagccctgctggcaaatatctgcttgagcgtggtgtg
cagccaaaggatttcaattcttatggaagccggcggggcaatgacgaagtgatggcacga
ggaacctttgcgaacatcaggattatgaatcggctgttaaatggagaagtcggaccaaag
acagttcatgttcctactggagagaagcttttcgtgttcgatgctgcaatgagatataaa
gctgatggatatcacaccatagtgctggctggagaggaatatggcagcgggagttctcgt
gactgggctgccaagggacctatgttactgggggtgaaagcggtgatcgccaagagtttc
gagacgatccaccgcagcaacctagtgggaatgggggtgatgccactgtgcttcaagcct
ggggaggatgctgattctctggggctcacaggtcacgagcgctttacgataaggctccct
agcaatgtaagtgagatacaaccggggcaggatgtcgaagtggtcactgacagtgggaag
tccttcacctgcaagctccgtattgatactctggtggagctggcctactttgaccatggt
ggaatccttcactatgtgctaaggaacttggtgaaacagcagcagcggtaa
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integrated database retrieval system
