Panicum hallii (Hall's panicgrass): 112881485
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Entry
112881485 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112881485
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112881485
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112881485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
FANCL_C
Prok-RING_4
zf-Vps39_C
zf_RING_Vps8
zf-C3HC4_4
RINGv
Prok-RING_1
zf-Nse
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
112881485
NCBI-ProteinID:
XP_025801976
LinkDB
All DBs
Position
2:complement(45810407..45811366)
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AA seq
162 aa
AA seq
DB search
MGISSMPEPRDSLLGFLVYNAVISLAALAGLVRAALVFLDLGDWEADGAGSGDRLVSAAG
PGSAERMQRPLLRPARLGPIPGVTTTCGAAAAAAGDDCSVCLAGFGAEAVVNRLPCGHLF
HRGCLETWLRYERATCPLCRAHVPVPAVPVDDTPGLRYPECE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggggatctcgagcatgccggagccgcgggacagcctgctgggcttcctggtctacaac
gcggtgatctcgctcgcggcgctggcggggctggtgcgggcggcgctggtgttcctcgac
ctcggggactgggaggccgacggcgccggcagcggggaccggctcgtgtccgccgcgggg
ccggggtccgcggagaggatgcagaggcccctcctccgcccggcgcggctcggcccgatc
ccgggggtcactacgacgtgcggcgcggcggcggcggcggccggggacgactgcagcgtg
tgcctggcggggttcggcgccgaggcggtggtgaaccgactcccctgcgggcacctcttc
caccgcggctgcctcgagacctggctccggtacgagcgcgccacctgcccgctctgccgc
gcccacgtccccgtccccgccgtccccgtcgacgacacgccggggctccggtacccggag
tgcgagtga
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