Panicum hallii (Hall's panicgrass): 112881487
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Entry
112881487 CDS
T07366
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like isoform X1
KO
K03253
translation initiation factor 3 subunit B
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112881487
03012 Translation factors [BR:
phai03012
]
112881487
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112881487
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
eIF-3
112881487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
Beta-prop_ELP1_1st
RRM_1
Motif
Other DBs
NCBI-GeneID:
112881487
NCBI-ProteinID:
XP_025801979
LinkDB
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Position
2:complement(46560834..46565680)
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AA seq
727 aa
AA seq
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MVEARLGFYHHPPQLLDGLEARARELGIDLSSIDLDAITLPAGEDLDTPSDDDEILQNED
PPEVEMGFANTIVVDNLPVVPPEKFEKLGNIIRKIFSHASAIKEGGFWMPVNADTNVTYG
YCFIEYNTPQEAQLAREMGNGYKLDKSHILVVNIFDDFERYMKVPDEWTAAETKPYTPGE
NLHKWLTDENARDQFVMRAGTYTEVYWNDARQLSSELIYQHQFWTDCFIQWSPLGTYLAT
VHRQGSQVWGGEDKFVRLMRFAHPQVELIDFSPGERFLVTYSSHKPSNPRDTHKVVLNIF
DVRTGKLMRDFKGSADEFTTAENIGFSGVPWPCFRWGGGKDDKYFARLGKNTISIYETHT
FSLIDKKSLKIENVVDFCWSPTDPMVALFVPEMGGGNHPARVSLMQIPGKEELRQKNLFS
VSDCKMYWQSNGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAF
AWEPKGHRFAVIHGDDPNPDISFYCMQAANTSRVSKLTTLKSKEANALYWCPTGHFILIA
GLKGFTGKLEFYNVDELETMATGEHFMATDIKWDPTGRYVATVVTAVHEMENGFQIWSFS
GKFLYKLSKDHLYQFSWRPRPPALLAPEKEEEIMRNLKKYSKKYEQEDRDASNQMTEQER
VKRTQLEEEWAAWVAKWKQLHEEDHSHRMELRDGDASDDEEEYEAKEVEVEEVVGIIEEV
VAFELDH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggcccggcttggcttctatcaccacccgccccagctgttggacggtctcgaa
gcgcgtgcgcgggagctcgggatcgacctctcctccatcgatctcgacgccatcaccctg
cccgccggcgaggacctcgatacccccagtgatgatgacgagatacttcagaatgaggac
cctccagaggtcgaaatgggctttgccaacactattgtggtggacaacctgccagttgtt
cctccggaaaagtttgagaaacttgggaacataatacgcaagatcttcagccacgctagt
gcaatcaaagaaggtggcttttggatgccagtaaacgcagatacaaatgtgacctatggc
tactgtttcattgagtacaataccccacaggaagctcaacttgctagggaaatgggcaat
ggatacaaactcgacaagtctcacatattagtagttaacatatttgatgacttcgagagg
tatatgaaagttcctgatgaatggacggctgctgaaactaagccatacactcctggtgaa
aatctgcataagtggctaactgatgagaatgcccgagatcagtttgtcatgcgtgctggt
acatatacggaagtttactggaatgatgcaaggcagttgtcgtctgagctaatttatcaa
caccagttctggacggattgtttcattcaatggtcccctctcggaacgtacttggcgaca
gtgcataggcagggatcgcaggtgtggggtggtgaagataagtttgtgcgtttaatgcgc
tttgctcatccacaggttgaacttattgacttttctcctggtgaaaggtttttggtaaca
tacagcagccataaacccagcaatcctagagacacacataaggttgtcttaaatattttt
gatgtaagaactgggaaattaatgcgggatttcaagggaagtgctgatgaatttaccact
gctgagaacattggtttttctggtgttccatggccttgcttcaggtggggtggtggtaag
gatgataagtattttgcgaggcttgggaagaataccatatctatttatgaaacccataca
ttctcccttattgacaagaaatctttgaagatagaaaatgtagttgacttctgctggtca
cccactgatcctatggtagccttgtttgtgcctgaaatgggtggcgggaatcaccctgca
agggtgagtctcatgcaaattcctggaaaagaggagctgcggcagaaaaatcttttcagt
gtcagtgattgcaaaatgtattggcagagcaatggggaatatcttgctgtccaggttgat
aggtatacaaaaacaaagaagagcacttacacagggtttgagctttttagaattaaagaa
agggacatcccaattgaggtccttgaactggacaacaaaaatgacaagatcattgccttt
gcatgggagcccaaaggccatcgttttgctgtcattcatggtgatgatcctaatcctgac
attagcttttactgcatgcaagcagctaacactagccgtgtgtcaaagcttactactctc
aagtccaaggaagctaatgcattgtactggtgtcctactgggcatttcattctcattgct
gggctgaagggctttactggcaagctggagttctacaatgttgatgaacttgagacaatg
gcaacaggagaacattttatggctactgacatcaagtgggatcctactggaagatatgtt
gcaactgtggttacagccgtccatgaaatggagaatggttttcaaatatggtcgtttagt
ggcaagtttctttacaagctgtcaaaggatcatttatatcagttctcttggcggcccaga
ccaccagcactactggctcctgagaaggaagaggagatcatgaggaacctgaagaagtac
agcaagaagtatgaacaagaggatcgggatgcatctaaccagatgactgagcaggagcgc
gtgaagcggacgcagcttgaggaagagtgggccgcatgggttgccaagtggaagcagctg
cacgaggaagaccattcacataggatggagctcagagatggggatgccagcgacgacgag
gaagagtacgaagccaaggaggttgaggtcgaggaggtggtgggcatcatagaagaagtt
gttgcattcgagctggatcactga
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