Panicum hallii (Hall's panicgrass): 112881625
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Entry
112881625 CDS
T07366
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
phai04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112881625
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112881625
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112881625
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112881625
03036 Chromosome and associated proteins [BR:
phai03036
]
112881625
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112881625
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112881625
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112881625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
TOR1L1_N
SCD
CLASP_N
Cnd1
Adaptin_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
V-ATPase_H_C
DUF3102
Motif
Other DBs
NCBI-GeneID:
112881625
NCBI-ProteinID:
XP_025802190
LinkDB
All DBs
Position
2:complement(26987981..26993787)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKEN
DIVDWFIPVVKRLAAGEWFAARVSSCGLFHIAYPSASDQLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVVEKTVKPCLVELSEDPDVDVRYYANQALQACDQMMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgattgatgagcctctgtatccaattgcggtactgattgacgagcttaagaat
gaggatatccaattgcgtctaaactccatcagaagactttccacaattgcacgggcgctt
ggggaagaaagaaccagaaaggaactcattccttttcttagtgaaaacaatgacgacgaa
gacgaggtgcttcttgcaatggctgaggaattgggtgtgttcattccttatgttgggggt
gtagaacatgcacatgttttgcttcctccattggagacattgtgtacggtggaggaaact
tgtgtccgtgacaaggcagttgaatctctgtgccgtattggtgcacagatgaaggaaaat
gacattgtcgactggttcattccagtagtaaagaggctagcagcaggtgagtggtttgca
gctcgggtatcgtcatgtggtcttttccacatagcctatccaagtgcctcggatcaactg
aaaacagaattgaggactatctatggtcagttatgtcaggatgacatgcctatggtcaga
agagcagctgcatcaaatcttggaaagtttgcggccacagttgaacaaagtcatttgaag
acagaaataatgtcaatatttgatgatttaacccaagatgatcaagattcagtgcgtttg
ttggctgttgaaggctgtgctgctcttggtaaattgttggaaccacaagattgtgtagca
catattctcccagttattgtcaatttctcccaggataaatcctggcgtgttcgttatatg
gttgccaatcaattgtatgagctctgtgaggctgttggccctgagcctacaagagctgat
ttggtgcctgcatatgttcgtctccttcgtgacaatgaggctgaagtgcggatagccgct
gctggaaaagttactaagttctgtcgcatattaagtccacagctcgcaattcaacacatt
cttccatgtgttaaggaattgtcatcagattcatcccagcatgtccgttcagctttggct
tcggtcattatggggatggctcctgtattgggaaaggatgccaccattgaacaacttctt
cctatttttctctctttgttgaaggatgaatttcctgatgttcgactcaacataatcagc
aaacttgatcaagtgaatcaggttattggaattgacttgctgtctcaatcactgcttcca
gccattgtagaacttgcagaggataggcactggagagtccggcttgcaataattgagtac
atcccattgttggcaagtcaattaggtattgggtttttcgatgataagttgggggcactc
tgcatgcaatggttggaagataaggtcttctcaatcagagatgctgccgctaacaacttg
aagcgccttgcagaggagtttggtccagagtgggcaatgcagcatataattcctcaggtg
ctggaaaagatcaacaatccgcactacctgtatcgcatgacgattctgcaagctatctca
ttgttggcccctgtcatgggtgcagaaatcacttgtcaaaagctgcttccagtcgtcatt
aattcctcaaaggacagggttcctaacatcaagttcaatgttgcaaaagtactgcagtcg
cttgtaccgatccttgatcaatctgttgtggagaagactgtgaaaccatgccttgttgag
ctcagcgaggaccctgatgtggatgtaagatactacgcaaaccaggccctgcaggcgtgc
gatcaaatgatggtgtcaagctaa
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