KEGG   Panicum hallii (Hall's panicgrass): 112881667
Entry
112881667         CDS       T07366                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112881667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phai03041]
    112881667
Spliceosome [BR:phai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    112881667
SSDB
Motif
Pfam: PRP3 Prp3_C SabA_adhesion
Other DBs
NCBI-GeneID: 112881667
NCBI-ProteinID: XP_025802243
LinkDB
Position
2:27489895..27494275
AA seq 860 aa
MDRDRSSRRARDDDGHHRSRDRDDNHHRRRSRHDTDDHHKHDGGDDDRRRRHREKDGGGD
DEDRRSHRHHRDKDDRRSHRHRDGGDDGDDRRRDSRRSVSSSDSPPPSAKRDRSLSRPRE
SIERRDSADREPLSSSRKRKGHEGGGGGDEADRDVGKRARASVDPPPPKEERPRRERRRF
EDVDANGKNGDVRSKVSKEISSHDQKKGEFAVNGDLQSGAVHNDGSQQPLNAAPAVVSSS
VPVSSKVSSITTNNENEGVSVRSDEVTGKSSTDGSATSAAGKNSNLSLDALAKAKKALQL
KKELSEKLKKLPMLNKLGTTGQVSKKEDAKTAVETQTVSKGEAKHTGPVSGLPTSSVSGT
PAAAGAIGIPGLTNIPNLDAVKRAQELAAKMGFRQDPQFAPLINMFPGTSTELTVPQRPP
KAPVLRLDAQGREIDEQGKVISMTKPTNLSTLKVNINKQKKEAFQIIKPDLDTLAKSSAH
FDERMGINQNKLLRPKRPGFQFVEEGKLSRQAELHRIKSQFGEAQAKELKVKQAQLAKAK
AEVDMNPNLIEVAFGMRAPKQKQKEAIPDIEPWDAKILLSATYEDFTVEKLNMDRITIYV
EHPEPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKM
SNLMKVLGSEAVQDPTRLEMEIRTAAAEREQAHVDRNIARKLTPSERREKKERKLFDDPT
NTVETIVCVYKIRDLSHPQTRFKVDVNAQENRLTGAAVITDGISVVVVEGGKKSIKRYNK
LMLNRIDWAAAVSGEDDADEEPDKPVNSCALVWQGSVAKPAFHRFTVHNCRSEAAGKKVF
ADASVPHYWDLAVNFSEDSS
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggatcgcgaccgctcctcccgccgcgcccgcgacgacgacggccaccaccgctcccgc
gaccgggacgacaaccaccaccgtcgccgcagccgccacgacaccgacgaccaccacaag
cacgacggcggggacgacgaccgccgccgccgccaccgcgaaaaggacggcggtggcgac
gacgaggaccgccgcagccaccgccaccaccgcgacaaagacgaccgccgcagccaccgc
caccgcgacggcggggacgacggcgacgaccgccgccgcgatagccgccggtccgtgtcc
tcgtcggactccccgccgccctccgcgaagcgggaccgctcgttgagccgcccgcgggag
tcaatcgagcgccgcgactccgccgaccgcgagccgctgtcctcgtcacggaagcggaag
ggccacgagggcggtggcggtggggacgaggccgaccgagatgtcggcaagcgggctagg
gcctctgtggacccgcctccgcccaaggaggagaggcctaggcgtgagcgccggaggttt
gaggatgttgatgctaatgggaagaatggtgatgtgaggagtaaggtgagcaaggagatc
tcatctcatgaccagaagaagggggagtttgcagttaatggagatttacagagtggtgcc
gtgcataatgatggttctcagcaaccgctcaatgccgcacctgctgtagtgtcatcgtct
gttcccgtgtcttcaaaggtatcttcgattactaccaacaatgaaaatgagggggttagt
gttagatctgatgaggttactggaaaatctagtacagatggaagtgcaacctcagctgct
ggcaaaaatagtaatctatctcttgatgctttagccaaagcaaaaaaagctttgcaactg
aagaaggaactgtcagagaaactcaagaagttacccatgcttaataaacttggcactact
ggtcaagtttctaagaaagaagatgcaaaaacagctgtagaaacacagactgtttctaaa
ggagaagcaaagcatactggtccagtttctggtctgcccacgagtagtgtctctgggact
ccagccgcagctggtgcaattggtattccgggtcttacaaacattcccaatctggatgct
gtgaagcgagcacaagagcttgctgctaagatgggattccggcaagatccacagtttgct
cctctcatcaacatgtttcctggtacatccactgaacttactgtgcctcaaagacctccc
aaggctcctgttcttcgccttgatgctcagggtagggaaattgatgaacagggaaaggtt
atcagcatgacaaagccaacaaatttgagtactctaaaggtcaatataaacaagcaaaag
aaggaggcttttcaaatcataaagccagacttagacactcttgcaaaatcaagtgctcat
tttgatgaaaggatgggcataaaccaaaacaagctcctccgtcctaaaaggccaggattt
cagtttgttgaagagggcaaactctctaggcaagctgaattgcatcgaattaagagtcaa
tttggtgaagcacaagctaaagagctcaaagtaaagcaagcccagctcgctaaggcaaag
gcagaagtagatatgaacccaaaccttattgaagttgcttttggtatgagagctccaaag
caaaagcagaaggaagcaattcctgacattgagccatgggatgcaaaaattttactttct
gccacatatgaggatttcactgtggagaagcttaatatggacaggatcaccatatatgtg
gaacatccagagccaatagaaccaccggctgaacctgcaccaccgccgccacagccactg
aagttaactaaaaaagagcagaagaagctgagaacacagaggcgtcttgctaaggaaaaa
gataggcaagaaatgattaggcaaggcctattggagccacccaaaccaaaggtcaaaatg
agcaatcttatgaaagttctaggctctgaagctgtgcaagatcccacgcggctggagatg
gaaatcagaactgccgctgcagagcgtgaacaggctcatgtagaccgcaacattgctcgc
aagctcacaccatctgaacgccgcgagaagaaagagcggaagctttttgatgatcctact
aatacagtggagactatagtttgtgtttacaagatcagagacttgtcccatccacagaca
cgcttcaaagtcgatgtcaacgcacaagagaataggctaactggtgctgcagtcatcacc
gatggtatcagtgttgtggttgttgaaggagggaagaagtcaatcaaaaggtacaataag
ctcatgctcaaccggatagactgggcagccgcagttagtggtgaggatgatgctgacgag
gaacctgacaagccggtgaatagttgtgcattggtctggcagggcagcgtggcaaagcct
gccttccacaggttcactgtacacaactgccggagtgaggctgctggtaagaaggttttt
gctgatgcttctgttcctcactactgggaccttgctgtcaatttttctgaagattcatca
tga

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