KEGG   Panicum hallii (Hall's panicgrass): 112881779
Entry
112881779         CDS       T07366                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03083  Polycomb repressive complex
phai04120  Ubiquitin mediated proteolysis
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112881779
   04120 Ubiquitin mediated proteolysis
    112881779
  09126 Chromosome
   03083 Polycomb repressive complex
    112881779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112881779
   04121 Ubiquitin system [BR:phai04121]
    112881779
   03036 Chromosome and associated proteins [BR:phai03036]
    112881779
Membrane trafficking [BR:phai04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    112881779
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     112881779
   Cul7 complex
     112881779
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     112881779
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     112881779
SSDB
Motif
Pfam: Skp1 Skp1_POZ YHR052C-B
Other DBs
NCBI-GeneID: 112881779
NCBI-ProteinID: XP_025802429
LinkDB
Position
2:complement(48497519..48500159)
AA seq 217 aa
MKLQPISIPFNLDSIASAARVLPCSFLATPTNHHFNPFSTPAIGSMASDAAAGKDKMLML
ISCDKENFEVEESVARESRTILHMIEDGCTDNGIPVPNVNAKILAKVIEYCKKHVEARRG
ADADAVEPTAATNKASDDELKTFDADFVKVDQATLFDLILAANYLDIKGLLDLTCQTVAD
MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaagctgcaacccatctccatccccttcaatctcgactccatcgcttccgccgctagg
gttttgccttgtagcttcctcgccacaccaaccaaccaccacttcaaccccttttccacc
ccggcgatcggatcgatggcgtcggacgcagcggcggggaaggacaagatgctgatgctg
atcagctgcgacaaggagaacttcgaggtggaggagtcggtggcgagggagtcgcggacc
atcctgcacatgatcgaggacggctgcaccgacaacggcatcccggtccccaacgtcaac
gccaagatcctcgccaaggtcatcgagtactgcaagaagcacgtcgaggcgcgccgcggc
gccgacgcggacgccgttgagccgactgccgcgaccaacaaggcctccgacgacgagctc
aagaccttcgatgctgacttcgtcaaggtggaccaggccaccctcttcgacctcatcctg
gctgcaaattacctggacatcaaggggctgctggacctgacctgccagactgtcgcggac
atgatcaaggggaagactccagaggagatccgcaagaccttcaacatcaagaacgacttc
acacctgaggaagaggaggaagtgaggagggagaaccagtgggccttcgaatga

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