Panicum hallii (Hall's panicgrass): 112881844
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Entry
112881844 CDS
T07366
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03020
RNA polymerase
phai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112881844
09124 Replication and repair
03420 Nucleotide excision repair
112881844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112881844
03400 DNA repair and recombination proteins [BR:
phai03400
]
112881844
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112881844
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112881844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
PspAA
Motif
Other DBs
NCBI-GeneID:
112881844
NCBI-ProteinID:
XP_025802518
LinkDB
All DBs
Position
2:57842135..57845520
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AA seq
120 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFEDEKTRYEERAKQGF
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagatcgctatgagcgctttgtcgtgcccgagggcaccaagaaggtgtca
tatgagagggatacaaagattgtgaatgctgcatccttcaccatcgagcgtgaggaccac
accattggcaacatcgttcgcatgcagctgcacagggacccaaatgtgctctttgctgga
tataagctccctcaccctcttcagtacaagattattgttaggatccatactacgagccag
tcttccccgacacaggcctacacccaggctatcaatgatctagacaaggagctcgagtac
cttaagcaagctttcgaggatgagaagaccaggtacgaggaaagggcgaagcaggggttc
taa
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