Panicum hallii (Hall's panicgrass): 112881884
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Entry
112881884 CDS
T07366
Name
(RefSeq) histone-binding protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112881884
03083 Polycomb repressive complex
112881884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112881884
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112881884
Histone modification proteins
HAT complexes
HATB complex
112881884
HDAC complexes
Sin3A-HDAC complex
112881884
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112881884
PRC2.2
112881884
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112881884
Heterochromatin formation proteins
Other heterochromatin formation proteins
112881884
Chromatin remodeling factors
NuRD complex
112881884
NuRF complex
112881884
NuRF complex (fruit fly)
112881884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD_LRWD1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_SCAP
eIF2A
MIOS_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
112881884
NCBI-ProteinID:
XP_025802576
LinkDB
All DBs
Position
2:48530878..48536538
Genome browser
AA seq
464 aa
AA seq
DB search
MYGPGSYIFGLCGQRPNVFALKALACLPSPTRRFVPIPLAGDQQHAASNSRAKQQIEAAM
DGGSSSPTSPPSTAAPSAAEMEEYKNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESSTR
SHRLVVGTHTSEEAPNNLLLLDAVLPLPPRLAAAAAASGGAVPTPSVSVSRVAPHRGEVN
RARCMPQRPFTVATKTCLVEVHVYHLGDGDGDGSGKSGADVVLRGHDAEGYGLAWSPMKE
GRLLSGSYDKKICLWDLASGSGAPVLDAHQVFEAHEDLVEDVAWHLKDENIFGSVGDDCK
LMIWDLRTNKPEQSIAAHQKEVNSLSFNPFNEWILATASGDATVKLFDMRKLSRSLHTFD
SHEGEVFQVEWNPNLATVLASSAADKRVMIWDVNRIGDEQSEEDADDGPPELLFVHGGHT
AKISELSWNPSEKWVVASVSEDNILQIWEMAESIYCDDYSLQDS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggccaggaagttatatttttgggctttgtggacagaggcccaacgtgttcgcc
ttaaaagcccttgcctgcctaccctccccaacccgtcgcttcgtccccattcctttggcg
ggagaccagcagcacgccgcctccaattcccgcgcaaagcagcaaatcgaagcagccatg
gacggcggatcctcctcgccgacgagccccccatcgacggcagccccgtccgcagcggag
atggaggagtacaagaactggaagaagaacgcggcggtgctctacgacctcgtcatctcc
cacccgctcgagtggccgtcgctcaccgtgcagtggctcccctcagagtcctcgacccgc
agccaccggctggtcgtgggcactcacacctccgaagaggcccccaacaacctcttgctc
ttggacgcggtgctcccgctcccgcctcgcctcgcagcggccgccgctgcctcaggcggc
gccgtcccaaccccgtccgtgtccgtctcccgcgtggcgccgcaccggggcgaggtcaac
cgcgcgcgctgcatgccgcagcggccctttacggtggccaccaaaacgtgcctggtcgag
gtgcacgtgtaccatctcggcgacggcgacggcgacggcagcgggaaaagcggcgccgat
gttgtgctacgggggcatgacgcggagggttatggtttggcgtggagcccgatgaaggag
ggcaggctgctgagcggctcgtatgataagaagatttgcctgtgggatcttgcctctggg
agcggggctcctgttctggatgcacatcaggtgtttgaggctcatgaggatctcgttgaa
gatgttgcttggcacctgaaagatgaaaatatatttggatctgttggggatgactgcaag
ttgatgatatgggacctgcgaacaaacaaaccagaacaatctattgctgcacaccaaaag
gaggtgaactcattgtcattcaatccatttaatgaatggatcttggctacagcatctgga
gatgcgactgttaaactatttgatatgcgaaaattatcaagaagcttgcacactttcgac
agccatgagggggaggtgtttcaggttgaatggaatccaaatttggctactgtattagct
tcatctgctgcagacaaaagagtgatgatatgggatgtcaacaggattggagatgagcag
tcagaggaggacgccgatgacggacccccggagctgctgttcgtccacggaggccacacg
gccaagatatcggagctgtcgtggaaccccagcgagaaatgggtcgttgccagcgtgagt
gaggataacatcctgcagatctgggagatggcggagagcatctactgtgatgactactct
ctgcaggacagctga
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