Panicum hallii (Hall's panicgrass): 112881940
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Entry
112881940 CDS
T07366
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112881940
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112881940
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112881940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
Prok-RING_4
zf_RING_Vps8
DUF2921
zf-RING_Vps41
zf_RING_Vps8_fungal
Baculo_RING
PHD_NSD
IBR_1
Motif
Other DBs
NCBI-GeneID:
112881940
NCBI-ProteinID:
XP_025802658
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Position
2:complement(50506183..50512258)
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AA seq
572 aa
AA seq
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MRPSAAAGRSGAVMRTAVVGLVLVGVALGPPLAAALRPLRERVASAGAASSAGLWGDEHA
FFKRDDNDIGPYSWNITGTYKGSWAFAGATNGSSRFLEFVKSKGDSVLELLSTPTKISGV
HYVQGSITFHDVIDNAHDHGLAQIRLEGVYIWPFRQLRIVANSGADGEPLQEEDYFLSNP
YHLLRIFSSQVFQESSEEKNRRKNSLTYDMEKHCNTEIAAKVVRVSSNPNDGEHEKYRLE
GLMESPAVDDDGECFSPILLNATSLNVEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSN
TQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYL
LAIWKASRPLNSGEGWEIMRRELSVLYSRFYGILLGGILLMYELHNFLRPLLLLMYSFWV
PQIVTNVIKDTRKPLHPQYILGMTVTRLAIPLYIFGCPSNFMRIEPDKKWCIAVTAFMGI
QAAVLLLQHYLGSRCFIPRQILPEKYCYHRKVEDSTNQPIDCVICMTTIDLTQRTSEYMV
APCEHIFHSGCLQRWMDIKMECPTCRRSLPPA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaggccctccgccgctgccggccgcagcggcgccgtgatgaggaccgctgttgtgggg
ctcgtgctggtcggcgtcgccctgggcccgccgctggccgcggcgctgcggccgctccgg
gagcgcgtcgcgtccgccggagccgcctcctccgccggtttgtggggcgatgagcacgcc
ttcttcaaaagggatgataatgatataggcccctattcatggaatattacgggaacgtat
aaagggagctgggcctttgctggtgccacaaatggttcatctaggtttcttgagtttgtg
aaatctaaaggtgattcagttctggaattgttgagcactccaacaaagataagcggggta
cactatgttcagggatcaattacattccatgatgtcattgacaatgcccacgatcatgga
ctggctcaaataaggttggaaggagtgtacatatggccttttagacaacttcggatagta
gcaaacagtggtgcagatggtgagccacttcaagaagaggattactttttgtcaaatcca
taccatttgctgcggattttctcctctcaagtattccaagaatcttctgaagagaagaac
cgaaggaagaattctctcacatatgacatggagaaacactgtaacacagaaatagctgct
aaggtggttcgcgtgtcatctaacccaaatgatggcgagcatgagaagtaccgattggag
ggtttgatggagagtccagccgtcgatgatgatggagagtgcttctcacctatcttacta
aatgcgacttctttgaatgttgaagtctattacaacaaagcagtcaactacacactgatg
gtcacttttatatctttccttcaagttttgctgttgattagacaaatggagcatagcaac
actcagtccggagctgctaaggtttctattttaatgattggccaacaagctatcatggat
gcatatctctgtctgctccacctgactgctgggatattggttgagtcgctgtttaacgcc
ttcgcaacggctgcattcttcaaatttgttgtattttctatttttgaaatgaggtacctt
cttgccatatggaaagcaagtaggcctttaaacagcggagaaggttgggagataatgagg
cgagagctgtctgttctttacagccgcttttatggtattcttttgggaggaatcctccta
atgtatgagttgcacaatttcttgcgcccacttcttctcctgatgtactccttttgggta
ccccaaattgttacaaatgtcatcaaggatacaagaaaacctctgcacccacaatatatt
ttaggcatgacagttacccgccttgctattccactgtatatatttggttgccctagtaac
ttcatgcgcattgagcccgacaagaaatggtgcatagctgttacggcattcatgggtatc
caagcagcagtgcttttgcttcagcactatcttggttctcgctgctttattcctcgccag
atcctgcctgagaaatactgctaccacaggaaggtcgaggatagcacgaatcagcccatt
gattgtgttatttgcatgactacaatcgatcttacgcaaagaacaagtgaatacatggtg
gcaccttgtgagcatatattccactcaggctgtttacaacgatggatggacatcaagatg
gagtgcccaacttgcaggcgctccctaccgccagcttag
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