Panicum hallii (Hall's panicgrass): 112881943
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Entry
112881943 CDS
T07366
Name
(RefSeq) eukaryotic translation initiation factor 4G
KO
K03260
translation initiation factor 4G
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112881943
03012 Translation factors [BR:
phai03012
]
112881943
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112881943
mRNA cycle factors
Stress granule specific factors
112881943
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
eIF-4
112881943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
112881943
NCBI-ProteinID:
XP_025802662
LinkDB
All DBs
Position
2:52052273..52060140
Genome browser
AA seq
1786 aa
AA seq
DB search
MSQRGDRGEGHRRPGRSSSFGGHRGGGVGGAGKGGGGSSGQPPLSSNRSFRKAGNGHGGH
QRVVSQPDTTGFQPAPAPVSHQTPTRPPVAPQNAAAHVPVPAPRPQHHDPQLSSSSPASE
KPGNAPLPKATHAAPRAPPKSSNPPVPQGASKGESSKGFNFQFGSINMNGLPQFPARTSS
APPNLDEQKRNQALLEELKVTPPGPMQPAPKQQPSQQQLHQQKQQQQQQPQQLLQQSQQV
PQQPQQQQSRKDAVGSSQPTSVNPHLPSQLKRDVHASPSVPNVASLRPTVQPMPGVQMSI
PFHHQPAPVPLQFGGHGPQLQPQVVPSSLQMSMGLTGSNAPQVPQQLYAPTIQHHQLQQQ
AMMHQGQGMSYQFAPQLGNIPMNIPPQYPQQQPNKFVAPRKTTVKITHPDTHEELKLDKR
MDSSGQRAAPNLTSQSQSQPVGGYAPHIGFFHPPSNSYNQSGIYYPPTTGVSQVPTGSSG
PRFNYPVTQSGQAITYMSPSAGPPVSGQSQMTVKPHPGGLQAEKSGTHPVTISAPPGKSD
APKLRPAEDAPASRQKDSEVVSGITVSNKSAHEKETKALLVSEKNPTVVSLLPTEGTKPP
TSVTANSALSLSGADLKNKESIQRSGSFKDNKKIVIKKDARNSSEPQHSASPTEDDSGDH
VETKNLNKELDLNSSSSGTAAPVPESRAGTAEADSIPVNAADIPGTDRSSATPTSEGTSE
PQGAESIAVSAVECEESKGALKVTTDASKDNISCDATERETPEVCAVTSNTDNSDAAPHE
TDQEQLPKESTPSVPEEQGMMSSSSKNSETSSHILDGSAVAVTTSETSEPTVQGASDGDS
DISPETGPAASNVTQISSEGQQKSESMSSDQSVAATTGSVRPVSREKPIVEITRTKSTAG
KRKKRKEMLSKADAAGISDLYNAYKGPEEKSEIISTAEGADSSSTVDTTHVLPDEQEMEV
SSSADDSKKKVEPDDWEDAADMSTPKLQSDSGNQAGTTKVLEADTTEGNGRKKYSRDFLL
TLSQHCTGLPVGFQMNEAVNAIMNNLTGKSYVVDREPHPSPGRGSDRPTSRGDRRGAAMA
DDRWTKGVPLSPGRDMDLANGPSIINYRGGPGGNHGVLRNPRGQPGGGLLLGPMHSVGPQ
VSRSGSDADRWQQKGLMPSPVTPMQAMHKAERKYVIGKVSDEEEAKQRQLKAILNKLTPQ
NFEKLFEQVKEVNIDSVATLTGVISQIFDKALMEPTFCEMYANFCFHLAGALPDFSEDNE
KITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRIRARRRMLGNIRLI
GELYKKRMLTERIMHECIKKLFGNYDDPDEENIEALCKLMSTIGEMIDHVKAKEHMDAYF
DIMQKMSTSQKLSSRVRFMLRDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERHAQSSR
LGRGPAVSSVPRRGAPPMDYGPRGSSALASPSSQQGSIRGMPPHSRGFGSQDIRFEERHQ
FDSRTVPLPQRAVKDEAITLGPQGGLARGMSIRGQPPVSNAELPSVVDHRRIVSGSNGYN
SLADRTSGRTPASSQSAGPSQRPASQEGRSGNKSYSEDDLREKSISAIREYYSAKDEKEV
ALCIEELNAPSFYPSVVSLWVNDSFERKDMERELLAKLFVSLCSGRHNLLSERQLIDGLA
SVLASLEDTLSDAPRATEYLGRLLARFVQENILSLQEVGKLIQEGGEEPGYLVQDGMAAD
ILWAVLDSLRLEKGDSFLNEVKSSSSLKLEDFRPQHLKRSKLDAFM
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcgaggggacaggggcgaggggcacaggagacccggccggtccagcagcttc
ggcggccaccgcggaggcggagtcggcggcgcgggcaagggcggcgggggctcctcaggc
cagcctcccctctcatctaaccgcagcttcagaaaggccggcaatggccacggcgggcac
cagagggtggtgagccagcctgataccaccggcttccagcctgctccggcgcccgtttcc
caccagacacctacgcgacctccagtcgcgcctcagaatgcagcagcgcatgttcccgtc
cctgcgccacggccacaacaccacgatccacaactatcgtcatcatcacctgccagcgag
aagcccggtaatgcaccattgccaaaagctacccatgctgcccccagggcaccacctaag
agctctaacccccctgttcctcagggagcatcaaaaggagaatcatccaagggatttaac
tttcaatttggaagtataaatatgaatggactaccgcaatttcctgctaggacaagctcg
gctcccccaaacttggatgaacaaaagcgtaatcaggcacttcttgaggaacttaaggtt
acacctcctggtccaatgcaaccggctcctaaacagcagccatcacagcagcagctgcac
cagcagaagcagcagcagcagcagcagccacagcagctattgcagcagtcacaacaggtt
ccccagcaaccacaacagcagcaatcaagaaaggatgctgttggttccagccaaccaacc
tccgtcaaccctcatcttccatcccaattgaaaagagatgtgcacgcttctccatctgtc
cccaatgttgcatctcttaggcctactgttcaaccaatgcctggggtgcaaatgtcgatc
ccctttcaccatcagccagcaccagttccattgcagtttggtggtcacggtccacaactg
cagccacaagttgtacccagctcattacaaatgtcaatgggattgacaggcagtaatgca
ccgcaagtcccgcagcagctatatgccccaactatccagcaccatcaattgcaacagcaa
gcaatgatgcatcaagggcagggtatgagttatcaattcgcacctcagttgggtaacatt
cctatgaacatacccccacaatatcctcagcaacagccaaataagtttgttgctcctcgg
aagactactgtaaaaattactcatccagacactcatgaagagttgaagcttgataagagg
atggactcttctggacagagggctgcccctaatttgacatcacaatcccagtcccagcca
gttggtggctatgctcctcatattggcttctttcatccgccatcgaattcctacaatcag
tctgggatttattaccctcctacaactggtgtgagccaggttcctactggatcctcgggt
cctaggtttaattatcctgtcactcagtctgggcaagcgattacatatatgagtccatct
gcagggcctccagtatctgggcaatcccaaatgacagttaaaccacaccctggtgggttg
caggctgaaaaatctgggactcacccggtcacgataagtgcgccaccaggtaaatctgat
gcccctaagctaaggcctgctgaggatgctccggcaagtcggcagaaggatagtgaagtt
gtgtctgggatcacagtttctaataaatcagcccatgagaaggagactaaagctctgtta
gtctcagagaagaatcccactgtggtaagcctgttgccaactgaaggtacaaaaccacca
acttcagtgactgcgaattcagccttatctttatctggagctgatctgaagaacaaagaa
tccattcaaaggagtgggtcatttaaggataataagaaaattgtcattaaaaaggatgcc
agaaattcatccgaaccacaacattcagcttcacccactgaagatgatagtggtgatcat
gtggaaactaagaacctgaacaaagagctggatttaaacagctcttcatcaggcacagca
gctccggtacctgaaagtagggctggtacagctgaagctgacagcataccagtgaatgct
gctgatattcctgggacagataggagctctgcaacaccaacttccgagggtaccagtgag
cctcaaggagcagaaagcattgctgtttccgctgttgaatgtgaggaaagcaagggtgct
ctcaaagtgaccacagatgctagcaaggataatatttcttgtgatgccactgaacgtgaa
acacctgaagtatgtgcagtgacttccaatactgataattcagatgcagcacctcatgaa
actgatcaggaacagttaccaaaagagtcgacaccgtcagtacctgaggaacaaggtatg
atgagttcctcatccaagaattctgagacttcatcgcatattcttgatggcagtgctgtg
gctgtgacgacttccgaaacttcagagcctactgttcaaggtgccagtgatggtgactca
gatattagtccggaaacaggcccagctgcttcaaatgttactcaaatttcatcagaggga
caacagaaatctgaaagtatgtcaagtgatcaatcagttgctgcaaccacaggttctgtt
cgaccagtatcaagggaaaagcctattgttgagatcactaggacaaaatccactgctggg
aagaggaagaagagaaaggaaatgctttctaaagctgatgctgcagggatttcagatctt
tataatgcatacaagggaccagaagagaagtctgaaattattagcactgcagagggagcg
gatagttcttcaacagttgatacaactcatgtgctgcctgatgagcaagaaatggaggtc
agttcatctgcagatgattcaaagaaaaaagttgagcctgatgattgggaagatgcagca
gacatgtctactccaaagctgcaatctgattctggaaatcaggctggcaccacaaaagta
ttagaagcagatacaactgaaggtaacggcaggaagaaatattcgcgggacttcctgttg
actttgtcacagcactgtactggtcttcctgttggatttcagatgaatgaagctgtcaat
gcaataatgaataatttaacaggaaagtcctacgttgttgatcgtgagcctcacccgagt
cctggaaggggttccgaccggccaacttctcgtggtgaccgccgtggtgctgccatggct
gatgacaggtggacaaaaggagtacctctcagtcctggtcgtgacatggacctagcaaat
ggaccatcaattatcaattatcgtggcggcccaggaggtaatcatggtgttttgaggaat
ccacgtggtcaaccaggtggtgggcttcttctaggacccatgcattctgttggacctcaa
gtatctcgcagcggctctgatgctgatagatggcagcaaaaaggtctgatgccttctcct
gtcacacccatgcaagcgatgcacaaagcagagagaaagtatgttattggcaaagtttct
gatgaggaagaggcgaagcagaggcaattgaaagccattcttaacaagttgactccgcaa
aactttgaaaagctttttgaacaagtcaaggaagtcaacattgacagtgtagctactctt
acaggggtcatttcacagatatttgacaaagctttgatggaaccaactttctgtgaaatg
tatgctaatttttgcttccatttggctggtgccttgccagactttagtgaagacaatgaa
aagattacatttaaaagactgcttttgaacaaatgccaagaggagtttgagagaggtgaa
agagaagaagctgaagctgataaaacagaggaggaaggtgagattaaacagaccaaagaa
gagagggaggaaaagagaatccgtgctcgaaggcgcatgttgggaaacatcaggttgatt
ggagaattgtacaaaaagaggatgttgacggaacggataatgcatgagtgcattaaaaaa
ttgtttggaaattatgatgatcctgatgaggagaacattgaagcactatgcaagttgatg
agtacaattggagagatgatagatcatgtaaaggcaaaggagcacatggatgcctatttc
gatataatgcagaagatgtcaacaagtcagaagttgtcttctcgtgtgaggtttatgttg
agagattcaattgacctgcggaaaaataaatggcaacagaggcgtaaagttgaaggtccc
aagaagattgaggaggttcacagggatgcagctcaagaaagacatgctcaatcaagtagg
cttggacgtggtccagctgttagttccgtcccaagaagaggagcacctcctatggattat
ggcccccgtggctcatctgcattagcatcgccaagttcccaacaggggagcattcgagga
atgcctccacattcgcgtggatttggttcacaagacatccggtttgaggaaagacatcag
tttgacagtagaactgttcctcttcctcagcgtgcagtcaaggatgaagctatcactctt
ggcccacaaggtggccttgctaggggtatgtctataagagggcaaccgccggtatcaaat
gctgaacttccttctgttgttgaccacagaaggatagtttctggttctaatggttataac
tctctggctgatcgaacctctggtagaacaccagcttctagtcaatctgctgggccttca
cagaggcctgccagccaggaaggccgttcaggaaataaatcatattctgaggatgatttg
cgagaaaaatctatttcggccatcagggaatattacagtgcaaaagatgaaaaggaagtt
gccttgtgtattgaggagttgaatgctccaagtttctatccttctgttgtatcactttgg
gtaaatgattcctttgagaggaaagacatggaaagagagttgctggctaaactttttgtc
agcctttgcagtggtcgacataatttgttgagcgaacggcaactcattgatggccttgca
tctgttcttgcctcattggaagatactttaagtgatgctccaagagccactgagtacctt
gggagacttcttgcaaggtttgtgcaggaaaacatattgtccttgcaagaggtaggtaaa
ttgattcaagaaggtggagaagaaccagggtatcttgtacaagatggtatggcagctgat
atcctttgggcagttttggattccttaagattagaaaagggtgattcattcttgaatgag
gtcaagtcaagttccagtttaaagttggaggatttcagaccacaacatcttaagcgatca
aagttggacgccttcatgtag
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integrated database retrieval system
