Panicum hallii (Hall's panicgrass): 112881987
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Entry
112881987 CDS
T07366
Name
(RefSeq) protein argonaute 18-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112881987
03036 Chromosome and associated proteins [BR:
phai03036
]
112881987
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112881987
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112881987
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112881987
microRNA pathway
RISC loading complex
112881987
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
TetR_C_27
STAT_int
Motif
Other DBs
NCBI-GeneID:
112881987
NCBI-ProteinID:
XP_025802711
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Position
2:49698005..49703011
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AA seq
825 aa
AA seq
DB search
MDIHRDEPLSPVRPGFGAAGTPCVVKANHFFVGLVDKGLHHYDVTISPETTLKGVYREVM
SKLVSEKRQTELGGRLPAYDGKKSLFTAGELPFKTKEFEVTLPGRTERRYKVQIKHATAV
SLHQLMMLMAGYHTDIPAHALQVLDIVLRDIVLNERNDMEYITVGRSFFSRIIDTVSLGQ
GVEAWKGFYQSIRPTQMGLSVIVDMSSTAFVRPMSLIQFVMEILNKDNPRTFGNITNMDY
AKLKKALKGVKVEVTHRGDARRKYRIATLTHSRPSIMDFESSSGVRKTVTDYFREAYQME
LQYGFLPCLQVGSDQRPIYLPMEVCKIVPGQQYRKKLESQQVSKLMDSTCQRPSAREANI
RQVVKRNDYNSTERSNEFGIEVDYHPTSVQARVLPAPTLKYYGTGSESLCYPKDGQWNMM
KKRVVDGARVCNWACINFCHDLQMNHVKKFCSDLVKWSRNTGVDMDELKLPIFIARPSQV
EADLSKRCQDARNLLGGQKIGLLLAILPDKNGSLYGNFKRICETEIGIMSQCCLAKYVIS
ASPSYFANVAIKINAKVGGRNTEFANPQESLPVVSSEPTIIFGADVTHPAALDDTAPSIA
SVVASQDWPKVAKYNGVVRAQGHRQELINGLENIVKDGVSEGQFKQVLEQEIPEIEKAWK
SLYNEKPHITFVVVQKRHHTRIFPDNHNDRRWADKSGNILPGTVIDKNICHPTEFDFFLC
SHAGIKGTSRPTHYHVLRDDNKFTADGLQSLTYNLCYLYSSCTRSVSIAPPAYYAHKLAF
RARFYVNQGSDVAMSGSSSSSSAPTAGPFPLPDIKDELKRSMFYC
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggacatccaccgcgacgagcccttgtcgccggtgcgccccgggttcggcgccgccggg
acgccgtgcgtcgtcaaagctaaccacttcttcgtcggcctcgtcgacaaaggcctccac
cactacgacgtgacgatctcaccggagacgacgctcaagggcgtgtacagggaggtcatg
tcgaagctggtgtccgagaagcggcagaccgagctcggcggccgcctcccggcttacgac
ggcaagaagtcgctgttcaccgccggcgagctgccgttcaaaaccaaggagttcgaggtc
accttgcctggcaggacggagagacggtacaaggtgcagatcaagcacgccacggcggtc
agcctgcaccagctgatgatgctcatggcgggctaccacacggacatcccggcgcacgcg
ctgcaggtccttgacatcgtgctgcgtgacatcgtgctcaacgaacgcaacgacatggag
tacattactgttggccggtccttcttctctcggatcatagacacggtgagtcttggccag
ggtgtcgaggcatggaaaggtttctatcagagcatcaggccaacgcagatgggattgtct
gtgatcgtagacatgtcttcaacagcttttgttcgacccatgtcactgattcaatttgtg
atggagattctgaacaaagataacccgaggacatttggaaatattactaatatggattat
gccaagctcaagaaggcgctcaagggcgtgaaggttgaagtcacacaccgaggagacgca
cgccggaagtaccggattgccaccttgacacatagtcgtccttctataatggactttgaa
tcctcatctggagttcggaagactgtcacggattacttcagagaggcctaccagatggaa
ttacagtatggttttctcccatgtctccaagttggcagtgatcagaggccgatctatctc
cctatggaggtttgcaagatagttcctggacagcagtacaggaagaagctggaaagccaa
caggtctctaagctaatggactcaacatgccagcgtccatctgcccgtgaggcaaacatt
cgtcaggttgttaaacgcaatgactacaatagcactgagcgttcgaatgaatttggcata
gaggttgactatcatcctacttcagttcaggctagagttctgccggctcccactctgaag
tactatggtactggatctgaaagtttgtgctacccaaaggatgggcagtggaacatgatg
aaaaagcgagtagtagatggtgcaagggtttgcaactgggcctgcattaacttttgtcat
gatttacagatgaatcatgttaaaaaattctgctctgatctggttaaatggtctcgaaac
actggagtggacatggatgagttgaagcttcctatattcattgctcgtcctagtcaagtt
gaagctgatcttagtaagcgctgtcaggatgcacggaacctgctgggagggcaaaagatt
ggccttctgcttgctatattgccagataaaaatggtagcttatatggaaatttcaaaagg
atctgtgagacagagattgggatcatgtcgcaatgttgtctggcgaaatatgttattagt
gcaagtccttcgtacttcgctaatgttgctattaagatcaatgccaaggttggagggagg
aacacagaatttgctaacccccaagaaagtttaccggttgtttcgagcgaaccaacgatt
atatttggtgctgatgttactcaccctgctgctctagatgatactgctccttccattgct
tctgttgttgcctcccaagactggcccaaggtggccaagtataatggtgttgtccgtgca
caaggtcaccgtcaagagctcatcaatggcctggaaaacattgtcaaggacggagtaagc
gagggccaattcaaacaagtgttggaacaagaaatcccggagatagagaaggcatggaaa
tctctgtacaatgagaagccacatatcaccttcgtagttgtgcagaagaggcaccacaca
aggatcttccctgacaaccacaatgatcgccgctgggcggacaagagtggaaatattcta
cctggcactgtaattgataagaatatatgccacccaacggaatttgatttcttcctgtgc
agccatgctggtatcaagggaacaagtcgccctacgcattaccatgtgctgcgggatgac
aacaagttcactgcagatggtctgcagtctctcacatataacttgtgctacttgtattca
agctgcactcgctcggtatcaatcgctcctcctgcatactacgcccacaagctcgcgttc
cgtgcccgcttctacgtcaaccaaggctccgacgtggcgatgagtggcagctccagcagt
tcatctgctcctactgctggtccgttcccacttccagatattaaggatgagctgaagagg
tccatgttctactgctag
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