Panicum hallii (Hall's panicgrass): 112882067
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Entry
112882067 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112882067
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112882067
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112882067
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IBR
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112882067
NCBI-ProteinID:
XP_025802828
LinkDB
All DBs
Position
2:43121778..43124326
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AA seq
348 aa
AA seq
DB search
MLDLVAMSADDSALAEDLQVEEVLQFSTHFKSENVCALCKQVIQSLEASWKPDNCDHVIC
IACFCRYTEASGLPKCAVASCESLCKAEAHHEIRVPHGTLISIEDMDSRNGKKPLDGMPQ
ELGQCSHGADAMISSEFYCSICMDTMHIGEFFPIDGCAHTFCISCVSQYIAAKVEENVLS
IGCPDPGCKDGVLHPEACRDVIPLQLFQRWGAALCDSSLGELKFYCPFKECSALLVDDPG
HGEAVITNVECPHCCRMFCAQCKVPWHDGVTCIEFQSLGKDERGREDLMLRKVAQDSKWQ
RCPKCKMYVERITGCVFIICRCGHCFCYLCASPMSRDNHCCKICKRTW
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctggacctggttgctatgtcagctgatgattctgcgctggctgaggatctgcaggtt
gaagaggttctccaattctcaactcacttcaagagtgagaatgtctgtgcactttgcaaa
caggtgatccaatcattggaggcctcatggaaacctgacaattgtgaccatgtcatctgc
attgcctgcttctgccgatacacagaggcctccgggctgcctaagtgtgcagtggcttct
tgtgaatctttgtgcaaggcagaggcgcatcatgagatcagggtgcctcatggcactttg
atctcaatcgaagacatggacagccgcaatgggaaaaaaccactcgatggcatgccgcaa
gagcttgggcaatgctctcatggtgcggatgcaatgattagcagcgagttctactgttcc
atctgcatggacacaatgcacattggggaattctttcccattgatggatgcgcacacacc
ttctgcatcagttgtgtgagccagtacattgctgcaaaggttgaggagaatgtactgtct
attggctgccctgacccggggtgcaaggatggtgtgttacacccagaagcatgccgtgat
gtgatcccgctgcagctgttccagaggtggggtgcggcgctctgtgactcatcattgggg
gaactcaaattctactgccccttcaaggagtgctcggctctgttggttgatgatcctggc
catggtgaggcggtgataacaaatgtggagtgcccacactgctgccggatgttctgtgcc
cagtgcaaggttccatggcacgatggtgtgacatgcatagagttccaaagcctcgggaaa
gatgagcggggcagggaggacctgatgctgaggaaggtcgcacaggatagcaagtggcag
aggtgccccaagtgcaagatgtacgtggagaggatcacgggctgtgtgttcatcatctgc
aggtgtgggcactgcttctgctacctttgtgcatcccccatgtctagggataaccattgt
tgcaagatctgcaagcgaacctggtga
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