Panicum hallii (Hall's panicgrass): 112882075
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Entry
112882075 CDS
T07366
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112882075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112882075
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112882075
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
CBP_BcsG
Motif
Other DBs
NCBI-GeneID:
112882075
NCBI-ProteinID:
XP_025802840
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Position
2:complement(1787884..1791057)
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AA seq
299 aa
AA seq
DB search
MPFPSYARKRGMFKDLAPMLWYSFGTMAALLQEVVLVYPTLSSPTLSANASSRVCNALGL
LQTVAAHPVTRTPLLAARIPLYLYPFLNTTSKAKSYEYLRLASLNVIDALVKVDDTEAVN
FLVTSQVIPLCLRIMETDSELPKLVATSIVKRIMLDEFGLQYICATADRFFQAAMALATM
VNALAEQPSARLLKHVVRCYLRLTDNPRARAALQICLPKPLKDGAFDNCLQDDPATRCCL
QQLLDNLGAPAGGGAPRPGAGGSAAAGGGARHPGPGPAARGSRGGGSSSQAGPSRAPWM
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccctttccgagttacgcaagaaaaagggggatgtttaaggatttggctccaatgctt
tggtactcttttggcacaatggctgcactactccaggaagttgtgttagtctaccctaca
ctttcatcccctacattatcagcaaatgcgtcgagccgagtctgcaatgcacttggactt
cttcagactgttgcagcacaccctgtgaccaggaccccccttttggcagctcgaattccc
ctgtacttatacccattcctgaacactaccagcaaggccaaatcttatgagtacttgcgc
ctcgctagccttaatgtcatcgacgctcttgttaaggtagatgatacagaagctgtcaat
ttcctggtgacaagtcaagtaatccctctgtgcttgcgaatcatggagacagacagtgag
cttccgaaactcgtggccacttccatcgtcaaaaggatcatgctagacgagttcgggttg
cagtacatctgcgccaccgcggaccgtttcttccaggcagccatggctttggcgaccatg
gtgaacgcactggccgagcagccctcagccaggctgctgaagcatgtcgtccgctgctac
ctcaggctgacggataaccccagggcccgtgccgcgctgcagatctgccttcctaagcct
ctgaaggatggggcgttcgacaactgccttcaggatgaccctgccacaaggtgctgtctc
caacagctgctggacaatctgggtgctcctgcgggcggcggagcacctcgtccaggcgcc
ggaggatctgcggcggctggaggtggagcacgtcatcctgggccgggccctgcggcgcgt
ggaagccgcggaggtggatcgtcgtctcaggcaggcccgagccgcgcaccgtggatgtaa
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