Panicum hallii (Hall's panicgrass): 112882154
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Entry
112882154 CDS
T07366
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112882154
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112882154
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112882154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
FAR1_N
Prok-RING_1
zf-RING_Vps41
zf_RING_Vps8_fungal
VPS18_RING_C
Prok-RING_4
zf_RING_Vps8
zf-HC5HC2H_2
DUF8112
PHD_NSD
PHD
RINGv
Motif
Other DBs
NCBI-GeneID:
112882154
NCBI-ProteinID:
XP_025802926
LinkDB
All DBs
Position
2:48281568..48285641
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AA seq
339 aa
AA seq
DB search
MEDSKGSGGGGGGGGDKPSAEPNPGSNPPPPAAAAAGVGDDGATAAAAAAAADASRRPFT
ALSQEEADLALARVLQEQERAYMLLRMNGGGGEGSDYGSSEAGSYEYDEEGEDDYEEELE
HHLRVHHHEHPAGDADGEGDVEGAEGSEGAEGSDYEEEFEEDEEGEPEVDPADFEDDEAY
ARALQDAEEREVAARLMALAGLSDWRAVDVEHEEDHVNDPQEAWQEVDPDEYSYEELIAL
GEVVGTESRGLSADTLASLPSVKYKTQNVQDGNAEQCVICRVEFEEGESLIALPCKHSYH
PECINQWLQINKVCPMCSAEVSTSGNKEAEVSASSNKEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcgaaggggagcggcggcgggggcgggggcggcggcgataagcccagcgcc
gagcccaaccctggttcgaatccgcccccacctgccgcggcggccgccggggtcggggac
gatggtgccaccgcggccgcggccgcggcagcggccgacgcgtcgaggcggcctttcacg
gccctcagccaggaggaggccgacctcgccctcgcccgcgtcctgcaggagcaggagcgg
gcgtacatgttgctacggatgaacggtggcggcggcgagggcagcgactacgggagctcc
gaggccgggagctacgagtacgacgaggagggcgaggacgactacgaggaggagctggag
caccacctccgcgtccaccaccacgagcaccccgcgggcgatgctgatggcgagggcgat
gtcgagggcgccgagggttccgagggtgccgaggggagcgactacgaggaggagttcgag
gaggatgaggaaggggagccggaggtagatcccgcggactttgaggatgatgaggcttac
gcgcgagcgctgcaggatgctgaggagcgtgaggtcgctgcgcggcttatggctctcgct
ggtctcagcgattggcgagcagtggatgtggagcatgaggaggatcatgtaaatgatcca
caggaggcatggcaggaggttgatccagatgaatactcttatgaggagctaatcgcattg
ggcgaagtagttggtacagaaagcagaggtctctctgctgatacacttgcctctttacct
tcagtgaagtacaagacacagaatgttcaggatggcaacgcagagcaatgtgtaatttgc
cgtgtggaatttgaggagggtgaatctttgattgcacttccctgcaagcactcataccac
cctgaatgcataaaccaatggctgcaaataaataaggtatgccctatgtgcagcgcagaa
gtttcaacctcaggcaacaaggaggcagaagtttcagcctcgagcaacaaggaggcgtga
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