Panicum hallii (Hall's panicgrass): 112882243
Help
Entry
112882243 CDS
T07366
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112882243
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112882243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_14
TPR_17
TPR_11
TPR_16
TPR_CcmH_CycH
TPR_7
TPR_6
TPR_9
ANAPC3
RPN7
ARM_TT21_2nd
ARM_TT21_5th
TPR_10
Fis1_TPR_C
ARM_TT21_C
ARM_TT21
HEAT_Nup120
TPR-S
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
112882243
NCBI-ProteinID:
XP_025803042
LinkDB
All DBs
Position
1:35354550..35368286
Genome browser
AA seq
1070 aa
AA seq
DB search
MASVYIPVQGTEEEVQVALDQLPHDASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR
QILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAPQKEAHFKDATQYYNRAS
RIDETEPSTWIGKGQLCVAKGELQMASDSFKIVLDEDGNNFPALLGQASVYFLMGEAEQQ
HKKSLEHYRNALDLYKRALRAYSNCPAAVRLGIAFCRYKLGQVEKARQAFQRVLQLDPQN
VDALVALAIMDLQTNEAGGIRRGMEKMKRAFEIYPYCTLALNHLANHYFFTGQHFVVEQL
TETALSSSNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVKEISKPQDFVLPYIGLGQ
IQLKFGDFKSSLTSFEKVLEVHPENCESLKAIAHIHAKSGETEKAIETFKKVTRIDPKDH
QAFVELGELLVESDWAAAMEYLKTARNLLKKAGEDVPVELLNGIGLLHFEKGEFEMAEQS
FKEALGDGLWVLIIDGKVGSPMANGSVQYKDQSFFHQLEEEGVPLELHPNKVTTLFNYAR
LLEEIHDSVRASLFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKIDEKNP
NALSRLGSLELQSDETWLTAKEHFRNAKEATKGDAYSLLQLGNWNYYAANRPEKKAPKFE
ATHREKAMELYQSQVLKQHHSNMFAANGIGILYAEKAKWDVAKELFTQVHEAASGSIFVH
MPDVWINLAHVYFAQGHFQQAVKMYQNCLRKFFYNTDATILLYLARTHYEAEQWQDCRKT
LLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVEEVRATVTELQNAIRVFSLLSVA
STYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQNKQKMEVARQIALAEEARRR
AEEQRKFQLERRREEDELKQIKQQEEHFERVKEQWKTSSHIPGKRKDRSKNEDEEGGSEK
RRRKGNKRRKDQKTKTQYGEDEEDEYRDEPEAEDDYANLSRDDGDNSERAPDHLLAAAGL
EDSDAEDDMVRGHPQSAIERKRRAWSESEDDEPVQRPAAQPSPGANDLSE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgtgtacatcccggtgcaggggacagaggaggaggtccaggtggcgctggac
cagctcccccacgacgcctccgacatcctcgacattctcaaggcggagcaggccccgctt
cacctctggctcataatcgcgagagaatacttcaagcaaggaaagatagaacagttccgt
cagattctagaggaaggatctggccctgaaattgatgagtattatgccgatgtgaagtat
gaacggatagcaatccttaatgctttgggtgctttccatactttcttgggaaaggttgag
agagcaccacagaaggaagcacattttaaagatgccactcaatactacaatagagcgtca
aggatagatgaaactgaaccttctacgtggattggaaaaggtcaactctgtgtggccaag
ggtgagttgcaaatggcatccgactcattcaagattgtgttggatgaagatggaaacaat
tttccagctctacttggtcaggcttctgtttactttttaatgggtgaagcagagcaacag
cataaaaaatccctggagcattacaggaacgcactagatctctacaagagagctttgagg
gcctattccaattgtcctgctgctgtaaggcttggtatagccttttgccgatacaaactt
ggacaagtagaaaaagctcggcaagcttttcagcgtgttttacagctggaccctcaaaat
gttgatgctttagtagcactagcaatcatggacttgcaaacaaatgaagctggtgggatt
cgcagaggaatggagaaaatgaaaagagcatttgaaatttatccttattgtacattggca
ctcaaccaccttgcgaaccattatttcttcactggccaacattttgtggttgaacaattg
acagagactgctctctcttcaagcaatcatggactactgaaatcacatgcttactataac
ttagccagatcataccacagtaagggggacattgagactgctggacgatattacatggca
tctgttaaagaaatcagtaaaccacaagactttgtgttaccatatattggacttggtcaa
atacaattaaaatttggagacttcaaaagttcactaactagctttgagaaggtgctggag
gtacacccggaaaattgtgaaagtttgaaggctattgcacacatacatgcaaaatctggt
gaaactgaaaaagctatagaaaccttcaagaaagttaccaggattgaccccaaagatcat
caggcatttgtggaacttggtgaattgttggtagaatctgactgggctgctgctatggaa
tacttgaagacggcccgtaatctcctcaagaaggcaggggaggatgtccccgttgagttg
ctcaatggaattggacttcttcattttgagaagggagagtttgagatggctgaacaaagt
tttaaggaagcactaggtgatggtctttgggttttaattatcgacgggaaagtaggtagc
cctatggccaacgggagtgttcagtataaggatcagagcttctttcaccaacttgaagag
gaaggtgtgcctcttgaattacatccaaataaggtcaccacactgtttaattatgcaaga
ttactggaagaaattcatgactctgtcagagcaagcctcttttaccgtttcattattttc
aagtaccctgactacatagatgcctatctgaggctagccgccattgcgaaacaaagaaac
aatgtccaactgagtattgaactgataggtgatgctttaaagatagatgagaagaacccg
aatgcgttatctaggcttggaagtcttgagctccagagtgatgaaacctggcttactgca
aaggagcatttccgtaatgctaaggaggccaccaagggagatgcctactctttgcttcaa
ttggggaactggaattactatgctgctaatcgccctgagaaaaaggctccgaaatttgag
gctactcatagggagaaagccatggaactctatcagagtcaagtactaaagcagcaccat
agtaatatgtttgctgctaatggtattggaatcttatatgctgaaaaagccaaatgggat
gttgccaaggagttgtttacacaggtacatgaagccgcatctggaagtatatttgtacac
atgcctgatgtatggatcaatctggctcatgtatattttgctcaaggtcattttcaacaa
gcagttaaaatgtaccaaaattgtctgcggaagttcttctacaacacagatgcaactatc
cttttataccttgcccgaacacactacgaggctgagcaatggcaagactgcaggaaaact
ttgctgagagctatacatttggctccatcaaattatttgttacggtttaatgtaggagtg
tcaatgcagaaattctcagcatctactctgcaaaagacaaaacgaacagtcgaggaggtt
cgtgccacagtcactgaacttcagaatgccattagagtgtttagtctgttgtctgttgca
tctacgtaccattcccatggttttgatgagaggaaaatagaaactcatgttgagtactgc
aaacatttgcttgatgctgctaaggttcaccgtgatgcagctgagcaagccgagcagcaa
aataaacaaaaaatggaagttgcccgtcagattgctttggcagaggaagctcgccgaagg
gcagaagaacagaggaaattccagttagaaaggaggagggaagaggacgagctaaagcaa
ataaagcaacaggaggaacacttcgagcgtgtgaaggagcaatggaaaacatccagccac
atcccaggcaagagaaaagatagatcaaagaatgaagacgaagaggggggaagtgaaaag
aggaggaggaagggtaataagaggaggaaggatcagaagacaaagacgcagtatggggaa
gatgaagaagatgaatacagagatgaaccagaagcagaagatgactatgcgaacctgtcg
agagatgatggtgacaattcagagagagccccagatcaccttcttgctgctgctggtctt
gaagattctgatgctgaagatgacatggttaggggacatcctcaatctgcaatagaacgg
aagcgacgagcatggtcagaatctgaagatgacgagccagtccagagaccagcagcacaa
cctagcccgggcgccaatgatttgagtgagtga
DBGET
integrated database retrieval system
