Panicum hallii (Hall's panicgrass): 112882268
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Entry
112882268 CDS
T07366
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112882268
Spliceosome [BR:
phai03041
]
Complex A
Other components
Complex A specific factors
112882268
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
DUF3008
DUF4680
Motif
Other DBs
NCBI-GeneID:
112882268
NCBI-ProteinID:
XP_025803069
LinkDB
All DBs
Position
1:complement(3348057..3355931)
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AA seq
1042 aa
AA seq
DB search
MDHGRYAPHHGWENNSAPDGYGVIKEPDYRADGSYNGRRPVDEGFSRDSYGRGAYYQDVH
DRNMYPPPASVGAMWSQPRRKHDEEYATARDHRRHDTDYRNDGKHHEFDSYRGVDKLRDN
YHAADNYYESGSHRDFGVDRSKRIGSRERAEFHGEFEDRYRSSHQSREDSYERNHEYGRH
SYDSDYERSRRDSSWRRRDSCEGEHERRGLSRERDESPYMRHSRSRSRGRDDRSRSRSRS
RSPRARSRGRNQRDGFYDDNRFDRRREYDWDERRRGDSVAPSATVVVKGLSLKTNDDDLY
QILAQWGPLRSVRVIKERNSGMSRGFAFIDFHTVEAARRMMEGTAENGLEIDGRNVFFEY
SSKPTGGMGGPSLGQENFTRPTYGHRTAAAPCDWICTICGCMNFARRTSCFQCNEPRTED
ALPADATGSTPQFGRRGSELGPTHVLVVRGLDENADEEMLRYEFAKHAPIKDIRLVRDKF
THVSRGFAFVHFHSVEDATKALEATNGITLEKNGQVLRVAYAKSTHGPASGGSQSNSLAA
AAIEAASFAQQYDAIGWAPKEYNPDEKQSSNSETQKDGSAAQSGFVWDEKSGYYYDSASG
FYYDGNTGLYYDSNSGVWYSFDQQTQQYVPCDQNNTKAAGVVANENTKTSESNSGKKVVI
SAPAATIKQSEKTSLPDAVQAAANAALAAEKREKEKAKEIKLASKSSLIANKKKMNNVLA
MWKQRNQEGQAARIVLDDKELSRSDDKSNHSHSGTGFSSKSKPNSDSGNAKDMNSSANYN
SFGQGTASAQMLDSDVKPRPVSNSLGTTVMGVIRGSARGVIKSDTTFHALSDTGSAEPRT
TVTTSTKGLMTTPEALATPAPFKTDISALVSNTSSGVSGSGKRRFSEAPAQSQYRDRAAE
RRNLYGSSLGNDSVGLDSTGDYPSRKGSSELGSMPFPPGVGERSSGGEIGNTENYEVITA
DRAIDESNVGNRILRNMGWQEGLGLGKDGSGIKEPVQAKSVDVRAGLGSQQRKADPSLEA
HAGDSYKTIIQKKAIARFREMS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgggcgctatgctccacatcatggatgggagaacaacagtgcaccggatggt
tatggtgtaatcaaagagccagattatagggctgatgggtcctataatggtaggaggcct
gtggatgaaggcttttctagagattcatatggaaggggtgcatactatcaggatgtacat
gatagaaatatgtatccaccaccagcctctgttggtgccatgtggtctcagcctcggagg
aaacatgacgaggaatatgcaactgccagagatcacagaaggcatgacaccgattatcgc
aatgatggaaagcatcatgagtttgattcttacagaggagttgataaactccgtgataac
tatcatgctgctgacaactactatgaatctggcagtcaccgtgattttggtgttgatagg
agcaaaaggattggaagcagagaacgtgcggagtttcatggtgagtttgaagaccgctac
cgcagctctcaccaaagcagagaggacagctatgagagaaatcacgaatacgggcgtcac
agctatgattcggactacgagagaagcaggagagatagtagctggagaaggcgcgattca
tgcgagggtgaacatgaaagaagaggtttaagccgtgaaagggatgaaagtccatatatg
cgccatagccgttctaggtcacgtggccgtgatgaccgatcaagatcacggtctagatca
agatctcctcgtgcgagaagtcgtggtcggaaccaaagagatggcttttatgatgataac
cgctttgacagaagaagggaatatgactgggatgaaaggaggcgtggtgattcagtggct
ccatctgccactgttgttgtcaagggattgtccctcaagactaatgatgatgacctatat
cagattcttgctcagtggggccctctacgcagtgtgcgtgtgatcaaggaacggaattct
ggcatgtctcggggattcgcttttattgacttccatactgtggaagctgctcgtagaatg
atggaaggtacggcagagaatggccttgaaatcgatggtaggaatgtgttctttgagtac
agtagtaaaccaactggtgggatgggtgggccttctcttggacaagaaaattttacaaga
cctacatatgggcacaggactgctgctgcaccatgtgactggatttgtactatatgtgga
tgtatgaattttgcccgccggacctcctgttttcagtgcaatgagcctcgtactgaggat
gctctaccagctgatgcgacaggttccactccacagtttgggagaaggggatctgaacta
ggtccaactcatgttttagttgttcgtggcctggatgaaaacgctgatgaagaaatgctt
cgctacgaatttgctaagcacgcaccaataaaggatatccgccttgttcgagataagttt
actcacgtgtctagaggttttgccttcgtccatttccattcagtggaagatgctacgaaa
gctcttgaagctacaaatgggattacactggagaaaaatggtcaggttttgcgtgtagcg
tatgctaaaagtacacatggacctgcatcagggggttcacagtcaaacagccttgctgca
gctgccattgaggctgcatcatttgctcagcagtatgatgccataggttgggctccaaaa
gagtacaatcctgatgaaaaacagagtagcaactcggaaactcaaaaggatggttctgca
gcacagtcaggattcgtttgggatgaaaaatctggttactactatgattctgcctctgga
ttctattatgatggaaatactggcctttactacgacagtaattctggagtttggtattcg
ttcgatcaacaaactcaacagtatgtcccttgcgaccaaaacaatactaaggcagctggg
gttgtggccaatgaaaatacaaagacctcagaaagtaatagtggcaaaaaggtcgtgatt
tctgcacctgctgccacaattaaacagagtgagaaaacttcacttcctgatgctgttcaa
gctgctgcaaatgcagcactggctgcagaaaagagagagaaggagaaggcgaaagagatc
aagttggcctcaaaaagtagtctgatagctaataagaagaagatgaacaatgtcctagct
atgtggaagcaaaggaatcaagaaggacaggctgcacgaattgtccttgacgacaaagaa
ctgtcgcgctctgatgataaatctaaccattcacacagtggaactggattctcttcgaaa
agtaagcctaattctgactctggaaatgctaaagatatgaactcatctgcaaactataat
tcctttggccaaggaactgcatcggcccaaatgctggattcggatgtaaagcctagacct
gtcagtaacagtttgggaactacagttatgggtgttataagaggttctgctagaggagtg
atcaagtcggatactacgtttcatgcattatctgatactgggagtgccgagccccgcacc
actgtaaccacaagcacaaaaggcttaatgacaactcctgaggcacttgcaactcctgca
cccttcaaaacagatatatctgccttagtctctaatacttcatctggagtttctgggagt
ggtaaacgtcggttttctgaggcaccagcgcaatcccagtacagagaccgtgccgcagaa
agacgaaatctctatgggtcatcgcttggcaatgatagtgttggactggattcaactggt
gactatccgtcccgaaagggttcaagtgagctagggtcaatgccgtttcctcctggtgtg
ggtgaacgttctagtggtggtgagattggcaacactgaaaactatgaagttatcactgcg
gatagagcaattgacgaaagcaatgtgggcaaccgtattttacgcaacatggggtggcag
gagggtctgggtttgggaaaggatggtagtggtatcaaggaaccagtccaggcaaaatct
gttgatgtgagggctggactcggaagtcagcagcggaaagctgatccatcgctggaggcc
catgctggggacagctacaaaaccatcatccagaagaaggctattgcaagattcagggag
atgtcctag
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